Gene RS03041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03041 
SymbolRSp1500 
ID1223812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1882017 
End bp1882538 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID637241363 
Productsignal peptide protein 
Protein accessionNP_523059 
Protein GI17549719 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.667718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.239165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCAT TTCGCGTGGT CTCACGCAGG TTATCGTCTT CTCCGCGCGT GCTCGTGTTG 
ATGGCGGCAT TGCTTGTTTT CCCGGAATGG CTGTCGGCCG CCACCAAGAC GACCACCTTC
ACCGTCTCGC TCACGCTGCA GGCGGATTGC TCCATCAGCG CCAACGCGCT GAACTTCGGC
ACCCAGGGCG TGCTCGCGGC CAACGTGGAT CAGACCGCAA CCCTGAGCGT GACCTGCAGC
AATACCGCGC CATACAACGT CGGCTTCGAT GCCGGCACCA CCACGGGTTC GACCATCGCC
GCGCGGTTGC TGGCGGGCTC GGGCGCGGCC ACCGTCGGGT TCCAGCTCTA CAGTGACAGC
GCGCGGACCC AGATCTGGGG CAACACCGTC GGCACCGACA CGGTCAGCGG CACCGGCTCC
GGCACTGCGC AGGTCTTGAC CGTCTACGGT CGCGTGCCGT CGCAGAACTC CCCGGCGGCC
GGCACCTACA GCACCACGAT CACGGCCACC ATCACGTTCT GA
 
Protein sequence
MRPFRVVSRR LSSSPRVLVL MAALLVFPEW LSAATKTTTF TVSLTLQADC SISANALNFG 
TQGVLAANVD QTATLSVTCS NTAPYNVGFD AGTTTGSTIA ARLLAGSGAA TVGFQLYSDS
ARTQIWGNTV GTDTVSGTGS GTAQVLTVYG RVPSQNSPAA GTYSTTITAT ITF