Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03041 |
Symbol | RSp1500 |
ID | 1223812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1882017 |
End bp | 1882538 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637241363 |
Product | signal peptide protein |
Protein accession | NP_523059 |
Protein GI | 17549719 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.667718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.239165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAT TTCGCGTGGT CTCACGCAGG TTATCGTCTT CTCCGCGCGT GCTCGTGTTG ATGGCGGCAT TGCTTGTTTT CCCGGAATGG CTGTCGGCCG CCACCAAGAC GACCACCTTC ACCGTCTCGC TCACGCTGCA GGCGGATTGC TCCATCAGCG CCAACGCGCT GAACTTCGGC ACCCAGGGCG TGCTCGCGGC CAACGTGGAT CAGACCGCAA CCCTGAGCGT GACCTGCAGC AATACCGCGC CATACAACGT CGGCTTCGAT GCCGGCACCA CCACGGGTTC GACCATCGCC GCGCGGTTGC TGGCGGGCTC GGGCGCGGCC ACCGTCGGGT TCCAGCTCTA CAGTGACAGC GCGCGGACCC AGATCTGGGG CAACACCGTC GGCACCGACA CGGTCAGCGG CACCGGCTCC GGCACTGCGC AGGTCTTGAC CGTCTACGGT CGCGTGCCGT CGCAGAACTC CCCGGCGGCC GGCACCTACA GCACCACGAT CACGGCCACC ATCACGTTCT GA
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Protein sequence | MRPFRVVSRR LSSSPRVLVL MAALLVFPEW LSAATKTTTF TVSLTLQADC SISANALNFG TQGVLAANVD QTATLSVTCS NTAPYNVGFD AGTTTGSTIA ARLLAGSGAA TVGFQLYSDS ARTQIWGNTV GTDTVSGTGS GTAQVLTVYG RVPSQNSPAA GTYSTTITAT ITF
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