Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03040 |
Symbol | RSp1501 |
ID | 1223813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1883041 |
End bp | 1883625 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637241364 |
Product | signal peptide protein |
Protein accession | NP_523060 |
Protein GI | 17549720 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0471511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTC TCAATCGCAT CCGCCGTGCC CTGCTGGCAC TGCTGCTGGC GGGCACGGCT GCCGGCGCGC AGGCAGCGGG GCCGCTTGCT GCCGGTTCGC TGTATGCATC CGGCGCGGCG CTGACCGACC AGAGCGGCCG CGTCTTCCAC CTGGCCGACC TGCGCGGCGA GCCGGTGCTC GTCAGCATGT TCTATTCATC GTGCAGCATG GTCTGCCCGA TGATCTTCGA GACCATCCGC GCGACGCTGG ACAAGGGCGG CAAGTCCGCG CGCGACGGCG TGCGGGTGCT GATGATCACG GTCGATCCTG AACGCGATTC CGTCGCCGTG CTCAAGAAGA CCGCTGCCGA CCACGGCGCG GACGACCGCT GGCAGCTGGC CCGCGCAGAC AGCAGCGGTA CGCGCTCGAT TGCCGCGCTG CTGGGCGTCC AGTACCGGCG CCTGGCGGAC GGCGACTTCA ATCACTCCAG CACGATCGTC CTGCTCGATG CGCAAGGCCG CATCAACGCC CGCACCAATA CCCTCGGCGC GACCGACCCG AAGCTGGTCC AGGCGATGCG CAAACTGCTG GGTGCCGAGC GCTGA
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Protein sequence | MTLLNRIRRA LLALLLAGTA AGAQAAGPLA AGSLYASGAA LTDQSGRVFH LADLRGEPVL VSMFYSSCSM VCPMIFETIR ATLDKGGKSA RDGVRVLMIT VDPERDSVAV LKKTAADHGA DDRWQLARAD SSGTRSIAAL LGVQYRRLAD GDFNHSSTIV LLDAQGRINA RTNTLGATDP KLVQAMRKLL GAER
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