Gene RS03040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS03040 
SymbolRSp1501 
ID1223813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp1883041 
End bp1883625 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content69% 
IMG OID637241364 
Productsignal peptide protein 
Protein accessionNP_523060 
Protein GI17549720 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0471511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC TCAATCGCAT CCGCCGTGCC CTGCTGGCAC TGCTGCTGGC GGGCACGGCT 
GCCGGCGCGC AGGCAGCGGG GCCGCTTGCT GCCGGTTCGC TGTATGCATC CGGCGCGGCG
CTGACCGACC AGAGCGGCCG CGTCTTCCAC CTGGCCGACC TGCGCGGCGA GCCGGTGCTC
GTCAGCATGT TCTATTCATC GTGCAGCATG GTCTGCCCGA TGATCTTCGA GACCATCCGC
GCGACGCTGG ACAAGGGCGG CAAGTCCGCG CGCGACGGCG TGCGGGTGCT GATGATCACG
GTCGATCCTG AACGCGATTC CGTCGCCGTG CTCAAGAAGA CCGCTGCCGA CCACGGCGCG
GACGACCGCT GGCAGCTGGC CCGCGCAGAC AGCAGCGGTA CGCGCTCGAT TGCCGCGCTG
CTGGGCGTCC AGTACCGGCG CCTGGCGGAC GGCGACTTCA ATCACTCCAG CACGATCGTC
CTGCTCGATG CGCAAGGCCG CATCAACGCC CGCACCAATA CCCTCGGCGC GACCGACCCG
AAGCTGGTCC AGGCGATGCG CAAACTGCTG GGTGCCGAGC GCTGA
 
Protein sequence
MTLLNRIRRA LLALLLAGTA AGAQAAGPLA AGSLYASGAA LTDQSGRVFH LADLRGEPVL 
VSMFYSSCSM VCPMIFETIR ATLDKGGKSA RDGVRVLMIT VDPERDSVAV LKKTAADHGA
DDRWQLARAD SSGTRSIAAL LGVQYRRLAD GDFNHSSTIV LLDAQGRINA RTNTLGATDP
KLVQAMRKLL GAER