Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03018 |
Symbol | RSp0105 |
ID | 1222508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 118240 |
End bp | 120501 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637239964 |
Product | hypothetical protein |
Protein accession | NP_521666 |
Protein GI | 17548326 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.426915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCC CCAAGTTCAA GCACTTCGCG CCCAAGGTCG ATGCGCTCAA GGAAGTGCCG TTGAGGTACG AGTCCACCCC GCTCACGCTC GAATTCGGTC GCCCCATCGA CGGCCCCGAG AACGATGGCA AGCCGGTGAG CCGCCTGCGC AACCCGCTGC CGTGCCTCGT GATCTTCGTG CATGGCGTCA ACAGCGAGGG CGAGTGGTAC AACGACGCCG AGCGTCATCT CTGTGCGGGC GGCAATGATC GGCTGGGGCG CTGGGGAACC GGAGCCGAAT TGCGAACATC GGTCGAGAAA GAAGACGATC CCAATTACAC CTACGACATC CATCGTCCTC TCAAGCGCAC GCGCCCCCAT TTCGACGGCG TACAGAACGC CGCCAACAGT AACTATCTAT TCGCCCAGTC TCCGGTGATC CGTTTCTACT GGGGCTTCAA GGCTCGCAAA GGCGACTATG GCCGCCCGAG CGAGCACGAC TATCGCGACG CGCACCACCC CGAACTGCGC GACTACCCGG TAGCGCTGGA TGAGGACGAC GCCTGGGGCG GTGGCCCCTT TCAGAACGGC ACCTCGGGGC TGTGGCACAT GTTCCGCAAG GACAAGGGTT TCACGCTGGA CTTCCAGCAC TTCAATCCCA TCACCGACCG CTACCTGACC GAATCCCCAC CGCGCACCTA CTACGTTCAC GCCGCTCGCC GACTGGCCCA TCTGATCGCC ACCGTCCGCC GCAACAGCCC GCACGAGACC ATCAACATCG TCAGCCACAG CCAGGGCACC ATGGTGTCGA TGCTGGCAAC CCTCATGCTC AAGGAGCAAG GCGTGCGTGG CCCGGAGGCG CTGTTCGCGT GCAACAGCCC CTTCAGCCTG AACGAGCCCG GTGGCCTGAT GGAGTGTGCG CAGTTCGGCA ATGACTACGT CGTCACCCAG GCGGCACGCT TCGCCACCCT CAAGGCCGTG GCCGATGTGC TCAAGGAGGC CGGCGAGCAC GCCGACGCCA TCACCGAAGC CAACCAACAG GCGCAGTGTC TTTGCACTCC TGCGCGCGCG TCGCTGCTGA ACCGCGAAGA ATTCGGCAAG CTCTACGTCT ACGCCAACCC GCACGATCGG GTGATGGGCG CGAGCGTGCT GCGCTCGATC GGCTGGCGCG CGCTGACGCA GGCCGAGCAG GGGCGCGTGA GCGCTTCCAA CCTGCGGGTG CGCATGTTCG CGGAGAACAT CGAGGCGGGT AAAGGCGGAT ACCACTACAC CGCGTGCTCC AAGAGCTTCG CCATCACCAA GGACGACGAT GGCAAAGAGA TTCACATGGA GCGCACCGAG TTCTGGATTC CGAAGTCCGA AAAGATCGGG GGCGTCTACG GAATCTACTC GCCCCCGGAG AAAGCAGAGG AAGCCGTCCA CATCAATGCG CCCACCGTGC CGTGGCTGAT GGATCAGGCG CTGCGCCAGC ACATGGAGCA GGCCAATAAA ACGGACGGAA AGCCTGCTTG GGAGAGCTTG GCTGGATGGG ACGGTCGCCT CAAGGACTTT CACGAATACC GTGACTACCT GAAGCCTAAA AAGAGTGGCG GCGATGCGCG CGACGTGGCC GCCTTCGGCC AGGTGTACGG CCCGAACTAC GAGGTGGTAC GCATGGAAGT GGATGTCTAC GGCGTGCGTT ACCCGGTTTA CAAGACGATC GCCGAGGCAC AGCAGGATTT GATCAAGACC GCGCACAACC TGACCAATCA CAGCACCCTG CCGAGCAACG AATTCGTGGT GCGCGGCGTA ATGGCGTGGG ACTTGGCGAT GGGCCTGAAC CAGAGCTACA CCGATGTGGC CTACTGGACC TACCTCAAAG CACTGGCGGA CTGGAAATGC AGCGACCCGT ATTTCCTGGA GAACGACGAA GGCCACCAGC CCGAACCAGG CGAACCACCG CCCGGCGTGG ACCGCACCCT GACCTACCCG CAGCGGGACC CGTCCGTCGC GTCCGTAGAA CCGGTTGTCA CCGGCTACGC TTGCCCGCAA ACGGGCTGGT GGCAGTCCAA CGAAGCGGGC GCTATCGCCA GCGAGCGGCG CCAGTTCATC CGCGAAGGCC AGATCATGCC CAAGGTAGCG ATAGCGGGTC AGCCGTCGCT GTGGCAGCGT GTCAAGGGCG AGCGCCCCAC TTGGAGCACG GCCACGGTGT GGACGCTGGC GAGCACCGAG CAGACACCGC ACGCGGCCAA CGCGGATGCG TTCGCTGCTG AGGGCAACCG TGCGGGCGGG GGGGTGTCAT AA
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Protein sequence | MKAPKFKHFA PKVDALKEVP LRYESTPLTL EFGRPIDGPE NDGKPVSRLR NPLPCLVIFV HGVNSEGEWY NDAERHLCAG GNDRLGRWGT GAELRTSVEK EDDPNYTYDI HRPLKRTRPH FDGVQNAANS NYLFAQSPVI RFYWGFKARK GDYGRPSEHD YRDAHHPELR DYPVALDEDD AWGGGPFQNG TSGLWHMFRK DKGFTLDFQH FNPITDRYLT ESPPRTYYVH AARRLAHLIA TVRRNSPHET INIVSHSQGT MVSMLATLML KEQGVRGPEA LFACNSPFSL NEPGGLMECA QFGNDYVVTQ AARFATLKAV ADVLKEAGEH ADAITEANQQ AQCLCTPARA SLLNREEFGK LYVYANPHDR VMGASVLRSI GWRALTQAEQ GRVSASNLRV RMFAENIEAG KGGYHYTACS KSFAITKDDD GKEIHMERTE FWIPKSEKIG GVYGIYSPPE KAEEAVHINA PTVPWLMDQA LRQHMEQANK TDGKPAWESL AGWDGRLKDF HEYRDYLKPK KSGGDARDVA AFGQVYGPNY EVVRMEVDVY GVRYPVYKTI AEAQQDLIKT AHNLTNHSTL PSNEFVVRGV MAWDLAMGLN QSYTDVAYWT YLKALADWKC SDPYFLENDE GHQPEPGEPP PGVDRTLTYP QRDPSVASVE PVVTGYACPQ TGWWQSNEAG AIASERRQFI REGQIMPKVA IAGQPSLWQR VKGERPTWST ATVWTLASTE QTPHAANADA FAAEGNRAGG GVS
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