Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02992 |
Symbol | RSp0130 |
ID | 1222533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 150518 |
End bp | 152083 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637239989 |
Product | hypothetical protein |
Protein accession | NP_521691 |
Protein GI | 17548351 |
COG category | [S] Function unknown |
COG ID | [COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000718056 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.615169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGATA AGAAGACGCT GGGGGATGTG TTCAAAACCG TCGGATTGCC GCCTTACACA TACGTGAAGC CAAAGCACTT TGGAGAAGTG CGAGCTGACA TCTCGCAGGT TGGCAAGCAC CTCTTGATTG AGGGGCCTTC CGGAATCGGA AAGACCTGCG TTGTGTTCAA GGTATTTGAA GAGCTCCAAT GGAGCCAGGG GCGCGACTTT ACCTATGTTG GTTGCCGTGA TCAAAACGCG GAGCAGATCA TTGACGATTT TCTAAAAAAT GCAGCCGCCG GCAATGCGCT GAGTCCCTGT GTGTTGGTAA TAGATGATTT TCATCTCTTG AGTCAAGCGA AGAGAATGGA AATCGGCTCC ACGCTGAAAC GCTTGAGTGA CCGTGCGTTC GAGCAAGCCG AGCCAGCTAA AGTTATATTG ATCGGTATCC CCACTGCCGG CGTTTCCCTT CTCTCAGACG CGTACGACCT TGGGCCGCGC TTGGGTTCGT ACGCTTTGAC CCGTGCGTCC GATGTAGAGA TCGACAAATT GATTAGCGAA GGAGAGCAAG CTCTTGCCGT ACTGTTTGAA GATCGCGACG TTTTGCTGGC GGAAAGCGCA GGAAATTTCT GGCTGGCGCA GTACGTGTGC AATAAGGTTT GCGCGATTGA AGAAGTGTAT GAGACGCAAG ACGACGCGAA GATCCTGACG TTCGACATAC TCGGAATTAG GGGCCGGCTG ATGGCCGAAT TGACACAACG ATATCTACCT ATCGCAAGAA CGTTTGCCAA AGGAAAGCGG TGGCGTCCTG GTGGCAACAA GCCTTACCTC GAAATTTTGC TCGCGTTATG CAAAATTCAG GACTCGGTCG TGACATTCGA CCAGTTGCTG CAACTTGTTT CTGAGCGTCG GCGTCCCGGT CTTAAGGCGG TTCGTACCCG CATTTCAGAG GTCATATTTG ATCCTGATCA CGGAACTGAT CTACGAAAGC AAATTGCTTT TGAGGCGGAC TCTGGATTTT CGATTGAGGA TCCACTATTC AGGTATTTTC TTACCAATCT GGATTCGACT TTGCTTTTCC GCGATTTAGG TATTGAGGAG AACACTGTCG AAAGGGGGCG TTTATATACT TACGACATCG GATTCTCATT TGCGGGCGAG GCGAGGAGGC TGGTCGAGCT TGTCAATGCC GAGATGAAGG CTGAAGATAT CGTCACATTT TATGATTTCG ATCAGCAGGC CATTCTGCTG GCGATGGATT TGCAGGATAT TCTCGGGAAG GTGTATGGCG AGTCATGTAG GTATTATCTT GTTTTCTTGG ATAAGAATTA TCGTGAGAAA GTTTGGACTC GATTCGAGAA GGATGTTATG ACTAATGGGA AGCGCATTGA TCACATTGTG CCTATTGTTA TCGACGATGA AGGTGCTAGT GGAACGGTTG GAATATCAAA CACCATTGGT CGAATCGACT TGAAGGACGT TTGGGCGCAA ATCCAAAAGG CCGGGAAGAT TTCCACCGAC GATGTTAACA CCATCAAGAA CCGGTGTGTT GTGCCAATGC TCGAGAAAAT TGGAGCTGTA GCCTGA
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Protein sequence | MVDKKTLGDV FKTVGLPPYT YVKPKHFGEV RADISQVGKH LLIEGPSGIG KTCVVFKVFE ELQWSQGRDF TYVGCRDQNA EQIIDDFLKN AAAGNALSPC VLVIDDFHLL SQAKRMEIGS TLKRLSDRAF EQAEPAKVIL IGIPTAGVSL LSDAYDLGPR LGSYALTRAS DVEIDKLISE GEQALAVLFE DRDVLLAESA GNFWLAQYVC NKVCAIEEVY ETQDDAKILT FDILGIRGRL MAELTQRYLP IARTFAKGKR WRPGGNKPYL EILLALCKIQ DSVVTFDQLL QLVSERRRPG LKAVRTRISE VIFDPDHGTD LRKQIAFEAD SGFSIEDPLF RYFLTNLDST LLFRDLGIEE NTVERGRLYT YDIGFSFAGE ARRLVELVNA EMKAEDIVTF YDFDQQAILL AMDLQDILGK VYGESCRYYL VFLDKNYREK VWTRFEKDVM TNGKRIDHIV PIVIDDEGAS GTVGISNTIG RIDLKDVWAQ IQKAGKISTD DVNTIKNRCV VPMLEKIGAV A
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