| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02979 |
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| Symbol | RSp0141 |
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| ID | 1222544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 162946 |
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| End bp | 163335 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637240000 |
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| Product | putative general secretion pathway GSPG related transmembrane protein |
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| Protein accession | NP_521702 |
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| Protein GI | 17548362 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.811632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCCTC TGCGTACTAA TGAGACGTCG GCCTTTACGC TGATTGAATT GCTGGTGGTG
CTCGCCATTG TTGCGGTCTT GCTCACCATT GCCGTCCCAC GCTATTTCAG CAGCGTCGAC
CGCGCCAAGG AAACCGTCCT GGTCGAAAAC CTGCGCACCA CCCGCGACGC GATCGACAAA
TTCTTCAGCG ACACGGGCCG TTACCCGAAC GCGCTCGACG AGCTCGTGCA ACGCAGCTAT
CTGCGCACCG TGCCTCACGA TCCGGTGACC GACAGCGCCG ACACCTGGTT GCTATCGCCC
CCCGAGACCG CATACAAAGG GCGGGTGCGC GACCTGCACA GCGGCGCCAA AGGCAACGCA
CAGGATGGCC GGCCCTATGG CAGCCTTTGA
|
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| Protein sequence | MKPLRTNETS AFTLIELLVV LAIVAVLLTI AVPRYFSSVD RAKETVLVEN LRTTRDAIDK
FFSDTGRYPN ALDELVQRSY LRTVPHDPVT DSADTWLLSP PETAYKGRVR DLHSGAKGNA
QDGRPYGSL
|
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