| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02971 |
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| Symbol | RSp0149 |
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| ID | 1222552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 170188 |
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| End bp | 171375 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240008 |
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| Product | general secretion pathway GSPF-like transmembrane protein |
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| Protein accession | NP_521710 |
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| Protein GI | 17548370 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.42633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTCG AAGTGCGGGC GCTCCGTGGC GATGCCATGG TGAGCGTGAT CATTGACGCG
GTTTCCGAAC GCGAAGCCAG GCAGCAAGCG CAACAGCAAA GGCTCAGGCC GGTCAGCGTG
CGACGCATCG CCGCCGCCGC ACTTCCGCTG GCAGGCAAGC GGCACGACTT CTCGCTGCTG
CTGTTCAGCC AGGAACTGCT GACGCTGCTG GAGGCCGGCC TGAGCGTCTT CGAAGCGCTG
GAGACGCTGC ACGAAAAAGA AAAGCGTCCG TTCTCCCGCA GCGTCCTGGC CAGCGTGCTG
GCACGACTGT CGGAGGGCAA GCCGCTCTCC ACGGCATTCG GCGAGATGCC GGAGCTGTTC
CCTGCGCTCT ACACCAGCAT CATCCGCACG GCGGAACGCA CCAGCAATCT GCCGCAGTCC
TTGTCGCGCT ATGTCGAATA TCAAACGCGG CTGGACGGCG TGCGCGCCAA GATCGCCAGC
GCTTCGATCT ACCCCATGGT GCTCGCCGTT GTCGGGGCGG CCGTGATGCT CTTCCTGCTC
GGCTACGTCG TACCGCGCTT CGCGGTGGTG TACCAGGGTA CCGGCCGCGA ACTGCCGGCG
CTCTCCGCCC TGCTGCTGGC ATGGGGCACC TGGGTGGGGC AGCACCAGGC CATTGCGCTG
CTCTGCTTTG TCGGAGGCGG CGCGGGCCTC GTCGCCGCGG TGCGCTCACT GCGCCGCGGC
GGCGCATTCC TGCGCTGGTG CGCACGGTTG CCCGGCATGC GGGAGCGCAT CCACGCGTAT
CAGCTGGCGC GCTTCTACCT CACGCTCGGC ATGCTGCTGG AGGGCGGCAT GCCGATCGTC
GCCGCGATGG AGCTCGTCAA TGCACTGCTG CCGCCGGAGC TTCGATCGGC AGCCTCGCGC
AGCGCCGCCC GGATCGCTCG CGGGGAGAGC CTCTCTTGCG CGATGGAACA GGAAGCGCTG
TCCACGTCCG TCGTCTCCCG CATGCTTCGT GTCGGCGAAC AATCGGGCCG CATGGGCGAA
ATGATGATAC GCGCGGCCCA GGTACTCGAT GCCGATATCA CGCGGTGGAT CGATCGATTC
TCGCGCACCT TCGAACCGCT GATGATGGCA GCCATCGGTG TGGTGGTCGG CGCCGTCGTG
GTGCTGCTCT ACATTCCGAT CTTCGACCTG GCAGGGAGCC TGGGATGA
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| Protein sequence | MKFEVRALRG DAMVSVIIDA VSEREARQQA QQQRLRPVSV RRIAAAALPL AGKRHDFSLL
LFSQELLTLL EAGLSVFEAL ETLHEKEKRP FSRSVLASVL ARLSEGKPLS TAFGEMPELF
PALYTSIIRT AERTSNLPQS LSRYVEYQTR LDGVRAKIAS ASIYPMVLAV VGAAVMLFLL
GYVVPRFAVV YQGTGRELPA LSALLLAWGT WVGQHQAIAL LCFVGGGAGL VAAVRSLRRG
GAFLRWCARL PGMRERIHAY QLARFYLTLG MLLEGGMPIV AAMELVNALL PPELRSAASR
SAARIARGES LSCAMEQEAL STSVVSRMLR VGEQSGRMGE MMIRAAQVLD ADITRWIDRF
SRTFEPLMMA AIGVVVGAVV VLLYIPIFDL AGSLG
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