| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02969 |
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| Symbol | RSp0151 |
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| ID | 1222554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 172296 |
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| End bp | 177428 |
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| Gene Length | 5133 bp |
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| Protein Length | 1710 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240010 |
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| Product | putative RHS-related protein |
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| Protein accession | NP_521712 |
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| Protein GI | 17548372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00316448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGT CTTCGAGCCG GCTCGTAGAG CGGCCGTTGG CGCGCGTCGT CGCGTCTTTG
TTTGTCCTGG GTGCTTTTGG GACGGCCACG CCGTCATTGG CTGCCGCCAC CCAGACCACG
AATGTCTCCT GGCTGGAGAC GCAGATCCGG ACAGCCAAGC TGTTCGAAGA GCCTCTGGTG
GCCACGGGCC CGAGCAGCGC GGAAGAGCAG CAGGCGCTCT GGCAAGCCCT GGAGCAATAC
CGCGCCAGCG GCAGCGCCGA GCACGTCGCT GCGCTGCAAG CTTTTCTGGA TGCCCACCCG
GACAGCTCCT GGGGCTTGGC GCTGCGCACC AACCTGGGCC TGACGTATTA CCAGCTGGGC
TACTTCTCGC GCGCCATCGA TGCGTGGGAA TCGGCGTGGC GCGAATCGCG CGCGCTGTCG
CAACCGCAAG CCAAGCGCTT GGCCGACCGC GCCCTGGGCG AACTGCTGCG CATGCATGCC
CGGCTGGGCC ATGCCGACCG GGTGGAGGCG CTGCTCAAGG AGTCCAAGGA TCGTCCGCTG
CAAGGGCCGG CCACCGAAGC CGTGGCCGGC GCTCGCGAAG GTTTGTGGAT GATGCGCAAC
GACCATGGCG TGGCCTACCT GTGCGGTCCG ATGGCGCTCA AGAGCATCCT GCAGGCGCAG
GGCGCGGACC CGGCGCGCAT CGCCGCGCTG GACGCCGTGC GCTCGGGCCC GCATGGCATC
ACGCTGGAGA CGGTCGGTGA ACTGGCGCGG CGGGTCCAGT TGCCGTACAC CATCGCACGC
CGCGCACCGG GCACGCCGAT TCCGTTGCCG GCCGTGGTGC ACTGGAAGGT CAACCACTAC
GCCGCGATCG TCGGCGAGGA AGGCGGCCGC TATCACCTCA AAGACCCGAC CTTCGGCCGC
GACCTTTGGA TCAGCAAGGA CGCACTGGAA TCGGAAGCCA GCAACTACTT CGTCATTCCC
GAGCAGGCGG CCAAGCAGCC CGGCTGGAGC CAGGTCGCCC TGGCCGAGGC CAAGCAGATC
GTGGGCATGG GGGCGACCAC CGCGGTGGAC AACGCGCGCA CCACGCCCGA TGATCCCAAG
GCGTGCGACT GCGAAGCCCA GGGCCAGGAA GCCTCCAGCG CCGGTGATGC CAACTCAGGC
ATGGCGAACG TCGGCATGCC GCGCTACAAC GTGCACGCGA TGCTGGTCAG CCTGAACCTG
GTCGACACGC CGGTCAGCTA CCGTCCGCCC AAGGGCCCGG CGATCGGGCT TACGTTGACC
TACAACCAGC GCGAGGCCAA CCAGCCCGCC AACTTCACCT ACGCCAACCT CGGTCCGAAG
TGGACCTTCA ACTGGCTCTC GTTCATCCAG GACGATCCGG GCAGCCCCGG CTCCAACGTC
ATGCGCTACG TCGCGGGCGG CGGCGCCGTG TTCCCGAGCG GCTACAACGG CAGTGCCTTC
AGCCCGGATG CTCAGGACCA GTCCGTGCTG GTGCGCACCT CCGCCACCAG CTATGAGCGC
CGCCTGAAGG ATGGCAGCCG GGAAATCTAT GCACAGCCCG ATGGCGCGAC GTTCTACCCG
CGCCGGGTGT TCCTCACGCA GATCGTTGAT CGGCAGGGCA ACGCCGTCAC GCTCAGCTAC
GACGGCCAGC AGCGCCTGAC GGCCATCACC GACGCCACCG GCAAGCGCAC CACGCTCACC
TACGGCAACG CGAGCAACAA CACGCTGATC ACGCAGATCA CCGATCCGTT CGGGCGCACC
GCGCGCCTCG GCTACGACAC CAGCGGCCGG TTGAGCGACA TCACCGACGC GATCGGCATG
AAGTCCAGCT TCAGTTATGA CGCGGGCACC TTCATCAACG CGCTGACCAC ACCGTACGGC
ACGACGAAGT TCGCCTACGG CGAGAACGGG GTGCAGCGCT GGATCAACAT CACCAACCCG
CAAGGCGCGA CCGAACGGGT GGAGTACAGG CACCAGGCGC CGGGCATTTC CTACACCGAA
TCGCAGACGC CGGGCGGGAT GAGCGTATTC AACACGTTCA TCAACTACCG GAATACGTTC
TACTGGAATG CCGATGCCTA CGCGCAGGCG CCGGACGATT ACACGAAGGC GCGCATCACG
CACTGGCTGC ACACCAACAA CATCAACATG ACGGCGGGTG TGATCGAGAG CACCAAGGAG
CCGCTGGAAA ACCGGGTCTG GTACACCTAC GCCAATCAGC CGTTTCCGGC GGGCATCGGC
TCCACCGAGC AGCCGCTGGC AGTCGCGCGC GTGCTGGACG ATGGCAGCAC GCAGTTGATC
CGCTACAGCT ACAACGCGCA GGGCAGCGTC ACCAGCAAGA CCGACGCAGC CGGGCGGCAG
ACGTTGTACG AGTACGCTGG CAATGGTATC GACGCGCTGC GCGTCAAGCA GGTCAACGGC
GGGAGCACGG ACCTGCTGGC CGAGTACACC TACAACGATC AGCACGAGCC GCTGACGTAC
CGCGATGCCG CCGGCCAGCT GACAACCTAC ACCTACAACA CCGCAGGCCA GAAGACGAGC
GAGATCAACG CGCTGGGCCA GACCGTGCGC TGGGAGTACG ACGCCAATGG CTTCCTGCAG
CGCGTGGTCA ACGCCAACGG CAAATCCGCT GCGAGCTACA CCTATGACAC CATCGGCCGC
GTGGCCAGCC AGACCGATTC GGAAGGCCGT ACCGTCAAGT ACCAGTACGA TGCGCTGAAC
CGCCTGACGC TGACCCAGTA CCCCGACGGC ACCACGCGCC GCCAGACCTG GGACAAGCTG
GACCTGGTCA GCACGACGGA CCGCCTGGGC CGCGTCACGC GCTACACCTA TGACAGCGCG
CGCCATTTGA TGCAGGTGAC GGACCCGCTG GGCCGCCGCA TCCAATACGG CTACTACCCG
AACGGCAAGC TGAAGACGCT GACCGACGCC GCCGGCAACG TGACCACGTG GCAGCGCGAT
GTCCAGGGCC GCGTGATCGG CAAGACGTAC GCGGACGGCA AGGGCGACAC GCTTGCCTAT
GAGGCCACCA CCAGCCGCCT GAAGCGCATC ACGGACGCAC AGGGCCAGAG CAAGACGTTC
AGCTACACGA TGGACGACCG CGTGGCGGAG CTGGACTACA GCGGCGCGAC GAATCCGACC
GCGAGCGTGA GCTATCGCTA CGACAGCGCC TACCCGCGCA TCAGCAGCGT CACGGATGGC
ACGGGCAGCC ACAACTACAG CTACAACGAG GCAGGCAGCC CGGGCGCGAA CCGGGTGTCC
GAAGAGACGG TGCCCGGCCA GAGCGACACA CTGCGCTACC AGTACGACGC GCTGGGCCGC
CCGACCGAAC GCCGTATCGG CAGCCTGAGC GAGACATGGA GCTACGACGC GCTGGGCCGG
CAGGTCGGCC ACGGCACGCC GCTGGGCCAG TTCAGCTATG CCTACCTGGG CGAGACCGGT
CAGACGAGCA GCCAGCAGCT GGAAGGCAGC CGCCTGCGCA CGGCGTACCG CTACGAAGAC
AACCGCAACG ACCGCCGGCT GAAAGCCATC GACAACGCCG GCGCGATGAA GGGCGGTTGG
GCGGGCGGCG TCGGCGATCG GGACCAGGAC GCGCTGGCCG GCAGCCTGCA CATGCAGGGC
GGCCGCGTGC CCGTGGGCGA CGGCTGGCAT GACGGCGGTC GCTGGAACGA AGGAGACCGC
TGGCACGAAG GGGATCGCTG GCACGAAGGC GGACGCCATG GCGATTACGG TCACCACGAC
CGCGCCCCAT GGCCACCGTT CGGCCACGGC GGCGCGATGA GCCATCGGGC AAGCAGCTTC
TTCTACGAGA CGGACGCGGA GAACCGCATC GTGTCGCTGC TGGAAGCCGG CCGGGAAGGT
CCGAAGCCGC ACTGGTACCG CTATGACGCG GCAGACCGGC TGCTGGCAGA CGACAACCGC
GGCTGGAACG ACCGGCGCTA CAGCTATGAC GCGGCGGACA ACCGCACCAG TGCCACGAGC
CGGCAGGCCA AGCAGACGAT CGTGGCGAAC GCGCTGAACC AGATGCAGAC GGTGAACGGT
CAGCCGGCAC AGTACGACGC GGCCGGCAAC CTGCTGGAGG ACGAAGCGCG CCAGTACGAC
TGGGATGCCG AGCACCGGCT GATCCGCATC CGCTACAAGG CACAGGCGAG CAAGGAAACG
CGCTTCGGCT ATGACGGCCT GGGCCGCCGG ACGGTGATCA CGGAGGTGGA TGGCACGGGC
ACGACCGAGA CGCACTACAT CTGGTGCGGC GAGGTGATCT GCCAGAAGCG TGATGCCAAT
GGCCAGCTGC TGCGCGCGTA TTACCCGGAA GGCGAGTATG GCCAGGAGAT CGGCAAGCGC
GTGGCGAAGG CAGATGCGGG GATCGAGGCC GATGAGGATG GCGACGAGCG CTACGGCGGC
GATCAGGACG CCGGCAAGTC AGATCAGCCG GCCGAGACCG TCGGAAGCAT CGTCTACGCA
CGCAACCATC TGGGCAGCGT GACGGACACG CAGACGCTGA ACGGCCGCGC GGTGAGCCAC
ACGGAGTACG GTCCGTATGG CGAGCCGATC AAGAGCGAGG GCCGATCGGA GTACCGCAGC
GACTTTGGCT ATGCGGGGAT GCAGTATCAC GCGGCGAGCG GGATGTATCT GACGCAGTTC
CGAGCCTATG ATCCGGGTAC GGGGCGGTGG GTGTCGCGGG ATCCGATTGG GGAGCGTGGG
GGGATCAATC TGTACGCATA TGTTGGCAGC GATCCAATTT CATTTATTGA TCCGAAAGGA
CTCCAGGCGG CGGCTCCTGC TGCTGGTGCA ATTGCTGTCA TATGCCTGAG AAATCCTACT
GCCTGTGCGG CTGCAGCAGC AGCGGCAGCC GCAGCCGCTG CGAAGGCGGT AGATGCTGCT
GCACAAATGT GCAGTGATGG TATAGACAAG ATTCGTAACT GGTATGCGCA AGATTCGAGT
GGGGGGGCAG GCAGAGAGAA AGATGTTCCC AACCGTGGCG AGCCTGGGGA GGTAAGGGAA
GGGGAGCGTC GGACGCGAGA ATATGGCCCA GATGGCAAAC CAGCGAGAGA TTACGATAAA
CCGCATCAAG GTTATGACCG ACCACACGTT CATGAATGGC CTGGCGGTGT TAGAGAGCAC
CCGGGCCGCG ATTATTCGCC TTGGCCGAGG TAA
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| Protein sequence | MLLSSSRLVE RPLARVVASL FVLGAFGTAT PSLAAATQTT NVSWLETQIR TAKLFEEPLV
ATGPSSAEEQ QALWQALEQY RASGSAEHVA ALQAFLDAHP DSSWGLALRT NLGLTYYQLG
YFSRAIDAWE SAWRESRALS QPQAKRLADR ALGELLRMHA RLGHADRVEA LLKESKDRPL
QGPATEAVAG AREGLWMMRN DHGVAYLCGP MALKSILQAQ GADPARIAAL DAVRSGPHGI
TLETVGELAR RVQLPYTIAR RAPGTPIPLP AVVHWKVNHY AAIVGEEGGR YHLKDPTFGR
DLWISKDALE SEASNYFVIP EQAAKQPGWS QVALAEAKQI VGMGATTAVD NARTTPDDPK
ACDCEAQGQE ASSAGDANSG MANVGMPRYN VHAMLVSLNL VDTPVSYRPP KGPAIGLTLT
YNQREANQPA NFTYANLGPK WTFNWLSFIQ DDPGSPGSNV MRYVAGGGAV FPSGYNGSAF
SPDAQDQSVL VRTSATSYER RLKDGSREIY AQPDGATFYP RRVFLTQIVD RQGNAVTLSY
DGQQRLTAIT DATGKRTTLT YGNASNNTLI TQITDPFGRT ARLGYDTSGR LSDITDAIGM
KSSFSYDAGT FINALTTPYG TTKFAYGENG VQRWINITNP QGATERVEYR HQAPGISYTE
SQTPGGMSVF NTFINYRNTF YWNADAYAQA PDDYTKARIT HWLHTNNINM TAGVIESTKE
PLENRVWYTY ANQPFPAGIG STEQPLAVAR VLDDGSTQLI RYSYNAQGSV TSKTDAAGRQ
TLYEYAGNGI DALRVKQVNG GSTDLLAEYT YNDQHEPLTY RDAAGQLTTY TYNTAGQKTS
EINALGQTVR WEYDANGFLQ RVVNANGKSA ASYTYDTIGR VASQTDSEGR TVKYQYDALN
RLTLTQYPDG TTRRQTWDKL DLVSTTDRLG RVTRYTYDSA RHLMQVTDPL GRRIQYGYYP
NGKLKTLTDA AGNVTTWQRD VQGRVIGKTY ADGKGDTLAY EATTSRLKRI TDAQGQSKTF
SYTMDDRVAE LDYSGATNPT ASVSYRYDSA YPRISSVTDG TGSHNYSYNE AGSPGANRVS
EETVPGQSDT LRYQYDALGR PTERRIGSLS ETWSYDALGR QVGHGTPLGQ FSYAYLGETG
QTSSQQLEGS RLRTAYRYED NRNDRRLKAI DNAGAMKGGW AGGVGDRDQD ALAGSLHMQG
GRVPVGDGWH DGGRWNEGDR WHEGDRWHEG GRHGDYGHHD RAPWPPFGHG GAMSHRASSF
FYETDAENRI VSLLEAGREG PKPHWYRYDA ADRLLADDNR GWNDRRYSYD AADNRTSATS
RQAKQTIVAN ALNQMQTVNG QPAQYDAAGN LLEDEARQYD WDAEHRLIRI RYKAQASKET
RFGYDGLGRR TVITEVDGTG TTETHYIWCG EVICQKRDAN GQLLRAYYPE GEYGQEIGKR
VAKADAGIEA DEDGDERYGG DQDAGKSDQP AETVGSIVYA RNHLGSVTDT QTLNGRAVSH
TEYGPYGEPI KSEGRSEYRS DFGYAGMQYH AASGMYLTQF RAYDPGTGRW VSRDPIGERG
GINLYAYVGS DPISFIDPKG LQAAAPAAGA IAVICLRNPT ACAAAAAAAA AAAAKAVDAA
AQMCSDGIDK IRNWYAQDSS GGAGREKDVP NRGEPGEVRE GERRTREYGP DGKPARDYDK
PHQGYDRPHV HEWPGGVREH PGRDYSPWPR
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