| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02614 |
|---|
| Symbol | RSp1106 |
|---|
| ID | 1223418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1401175 |
|---|
| End bp | 1401636 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637240971 |
|---|
| Product | putative transcription regulator protein |
|---|
| Protein accession | NP_522667 |
|---|
| Protein GI | 17549327 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.532202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.750512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACAC GCAAGACCGC CTCTCCGTAC CCGAACCTGG CGCTGGACCA GCAGCTGTGC
TTTGCGCTGT ACTCGACCAT GATCGGCCTG AACAAGGTGT ATCGCGGCCT GCTCAAGCCG
CTGGGCCTCA CGTACCCGCA ATACCTGGTG ATGCTGGTGC TGTGGGAGCG CGACGCGCTG
ACGGTGTCGG AGATCGGCGA GCGGCTGTTT CTCGATTCGC CCACGCTCAC GCCCATGCTC
AAGCGGCTGG AGGCGGCGGG CCTGATCGGT CGCCAGCGCT CGGATGCCGA TGAGCGGCAG
GTGATCGTTT CGCTGACGGC CGAAGGCCAG CGCCTGAAGC ATCGCGCCAA GGACGTGCCC
GGCTGCGTGG CCGCCGCCAT GGAATGCGTG CCGGCCGAGC TGGAAGCCTT GCGTACGCAG
TTGACCGGCA TGAGGACGCG GCTCTTCAAG AACGCGGCCT GA
|
|---|
| Protein sequence | MDTRKTASPY PNLALDQQLC FALYSTMIGL NKVYRGLLKP LGLTYPQYLV MLVLWERDAL
TVSEIGERLF LDSPTLTPML KRLEAAGLIG RQRSDADERQ VIVSLTAEGQ RLKHRAKDVP
GCVAAAMECV PAELEALRTQ LTGMRTRLFK NAA
|
|---|
| |