| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02603 |
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| Symbol | RSp1097 |
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| ID | 1223409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1389929 |
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| End bp | 1392016 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240962 |
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| Product | hypothetical protein |
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| Protein accession | NP_522658 |
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| Protein GI | 17549318 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0697753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.14382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACA ATTTCCATAT TGCGCTACTG CTGTTTGCGT GGACCAGTGT CGGGCTGACC
ACGTTTGCGG CGTTGGATGC CGCGACACGC CTGCCAGGGG GGGCGTCCAT TGCGAAACGC
CGGGTCTGGC GTCTCGCCTG CGGCGTCATA CTCGGCGCCG GGCTCTGGTC GGGGCTGTGG
CTGGCTGAGG CGGGCCTGCA CCGGCTGCCG GCCACATCGG CCACAGGACC GCTCACCGCG
TCCCTGGCGG TGATGCTGGC CGCCTCGCTG ATCGTCTTCG TCGCCGTCCT GCCCCGGGCA
TCGTTTGCTG CCGCCGCCCA GCCGCTCGGG CGCCGGCGCA TTGCTCTGGC CGCGGCCGCG
CTCGGCATGG GGCTCGTCGC GGTCGAACTG ATGCTGACGC GCCCCTGGCT GTACGCGCCC
CGATCGCTCC TGCAAACGGT GACCAGTTGC GGCGGCGGCA CGCTGATCCT GCTGGCGGGC
GCCAGCCTGG CGATCTGCAT GGCGTTCTGG CCGCCTGCCA GCCAGCGCCG CGCGGCGGTC
GGCGTACGGG CGCGTGCCGC AGGGGTGCTG GCCACCTCCG CCGTGCTGTC GTTGATCGTG
TGGCCGTGCG CAGGCGCCCA GGGAGCCGAT GACACGCTGC TGCACGCCAT CCCCGTCATT
GTGCTGAGCG CTGGGGGCAT GCTGCTTGCG CTGGGCCTGC ATGCGGCATT GATGATGTTC
GAGGCGCGCA TCGATTCCGC GCAGGCGCAC CTCGCGGCCT CGCTGGAGCG CGTGACGCGC
CAATCGGCGA CCCCCGAGCC CCACGACACC CTGACCGGCC TGCCGACCCG CCTGCAGCTG
CAGCAGGCGC TCGACAGCGC AATCCTGTCG TCGTCACGGC GCGGGCGCCC CTTCGCCCTC
TTCTATCTCG ACCTGGACGG CCTGGGGCGG ATCAACGAGC AGTACGGCCG GGCCACCGGC
GACCGCGTGC TGGAGATCAT CGCCGAACGG CTGCGCCAGA CCATGCGTGA CGAAGACACG
GTTGCACGGC TGGGCAGCGA CGAATTCGGC CTCCTCGTCG AGGGCCTGCC GCTACCGGAA
GCCGCCGCCC CCATCGGTGA CAAGCTGCTG TTCCGCCTGC GCGAAGCGGT CGAAGTCGAC
GGGCGCCGCC TGCGCGTGGC CGCCAGCATC GGCGTGGCGA TCCATCCCTA CAACGGTGCA
ACCGCCGACG CGCTGCTCGC ACACGCCGAC GCGGCCATGT TCGAATGCAA GCAGGCCGGC
GGCAACGCCT ACCGGTTCTA TGAGCCTCGC CTGAACACCA CCGCCCACCG GGTGCTGCAG
ATTCAGCGGG CGCTGTCGCA CGCTGCGCTC AACGGGCAGC TCTTCCTGTA TTACCAGCCC
AAGTTCGATG CCCACACGCA ATCCATGACG GGCGCCGAAG CGCTGCTGCG CTGGAATCAC
CCGGAGCTCG GCCCCGTCTC GCCGGCGGAA TTCCTGCCCC TGGCCGAACG CACCGGCACG
ATCGTCGAAC TGGGCGATTG GGTCATCGAA GAGGTGTGCC GGCAGATCAT GCACTGGGAC
GCGGCCGGCA TGGCGCCCCT GAAGATCGCC ATCAACCTGT CGCCACGCCA GTTCCTGCAG
CCCGACCTGG TGCAGCGGCT GTCGCAGATC CTGTATCGCT ATCAGGTGGC GCCGGACCGA
CTGATGTTCG AGATCACGGA AACGGCCGCC ATGCGCGATG CCGGGCAAAG CATTGCCGCG
ATCCGGCAGA TCCAGTCGCT CGGTTTTGAA GTGGCCATCG ACGATTTCGG CACCGGGTAT
TCCAGCCTCA GTTATCTGCA GCGTTTTCGC GCCCAGCAGA TCAAGATCGA CCGCGCCTTC
ATCGGCGCGC TCGATGACAG CCCGTCGGAC GCCTACGCCA TCATCCGCGC GATTTGCGCG
ATGGCCCATT CGCTCGATAT GACAGTGGTG GCCGAAGGCG TGGAAACCGG CACGCAAATG
CAGGCACTGG TGAATCTGCG CTGCGATCAG GTCCAGGGCT ATCTGCTGGG CCGTCCGCTT
CCCGCCCGGG ATTTCCAAAC ACTGATCGAC CACAGGCAGG TGGCTTGA
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| Protein sequence | MHNNFHIALL LFAWTSVGLT TFAALDAATR LPGGASIAKR RVWRLACGVI LGAGLWSGLW
LAEAGLHRLP ATSATGPLTA SLAVMLAASL IVFVAVLPRA SFAAAAQPLG RRRIALAAAA
LGMGLVAVEL MLTRPWLYAP RSLLQTVTSC GGGTLILLAG ASLAICMAFW PPASQRRAAV
GVRARAAGVL ATSAVLSLIV WPCAGAQGAD DTLLHAIPVI VLSAGGMLLA LGLHAALMMF
EARIDSAQAH LAASLERVTR QSATPEPHDT LTGLPTRLQL QQALDSAILS SSRRGRPFAL
FYLDLDGLGR INEQYGRATG DRVLEIIAER LRQTMRDEDT VARLGSDEFG LLVEGLPLPE
AAAPIGDKLL FRLREAVEVD GRRLRVAASI GVAIHPYNGA TADALLAHAD AAMFECKQAG
GNAYRFYEPR LNTTAHRVLQ IQRALSHAAL NGQLFLYYQP KFDAHTQSMT GAEALLRWNH
PELGPVSPAE FLPLAERTGT IVELGDWVIE EVCRQIMHWD AAGMAPLKIA INLSPRQFLQ
PDLVQRLSQI LYRYQVAPDR LMFEITETAA MRDAGQSIAA IRQIQSLGFE VAIDDFGTGY
SSLSYLQRFR AQQIKIDRAF IGALDDSPSD AYAIIRAICA MAHSLDMTVV AEGVETGTQM
QALVNLRCDQ VQGYLLGRPL PARDFQTLID HRQVA
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