| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02601 |
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| Symbol | RSp1095 |
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| ID | 1223407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1386602 |
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| End bp | 1388275 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240960 |
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| Product | activation/secretion signal peptide protein |
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| Protein accession | NP_522656 |
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| Protein GI | 17549316 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.591465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.415625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGACCA CCACCATGCG GTTGGCCCTG GCCACAGGCG TCGCACTGGC CGGCCCCTTA
TCGAGCTGGG CACAAAGCAG CCCCGCACAG GGCAACCCGA TCGACACGCT GCCGCGCGTC
GACACCTCCC GCCCGCCCGA ACAGAAGATT CACGTGCAGG TCCAGCGACC CAACCCCGCG
CTCGAAAACC TGCTGGCCAC GCACCTCACA CCGAGCAAGT TCCAGATCGA AGGCGTCAAG
GCCCTGCCGT TTCCGGAGAT TGCCGCCCAC TTCGCGCCGA TGGCCGGCCA CGACGTCACG
GTCGCGCAAC TGCTGCAGGC CGCCAGCGAG GTCACCAAGC TGTATGCCGA CCGCGGCTAT
CCGCTGTCGT TCGCCTTCGT GCCGGCGCAG ACCTTCGAGG GCGGCGTGGT GCGCATCACC
GTGGTCGAAG GCTATGTGGC GCGCATGCGC ATCGAGGGCA AGCCCGGTCC GCTGGAAGCA
CGGCTGCGCG CCATCTCGAA GCACATGATG GATGAGCGCC CGCTGCGCCG CGAGACCTTC
GAGCGCGTGA CCGGCGTACT GGCATTGCAG CCCGGCGTGC AGATCACGGC GACCGTGCAG
CCGCCCACCA CGACCGACGG CGCCAGCGAA CTGGTGCTCG ATGTCAAGCG CCAGCCCTAC
ACCATCGGCA CCGGCATCGA GTATCGCTCG CCGGGCGTGC GCGCCGTCGT CACCGGCACC
CTCAATGGTC TGACGCCGCT GGGCGAGCAG ATCAGTGTCT CGACGCTGCA GCCGCGCGGC
CGCGATGACG AGAAGTACTA CTCCGCCACG TGGGCGCAGC CGATCGGCAC CGATGGCCTG
CTCGCCAAGC TCACGTGGTC GCACTATCGC GGCAGACCGG AAAATCTGCC GCTCGAGCAA
CTCGGCTACC AGTCGCGCTA CCTCACCGAT GCGCAACGCC TCGGCCTGTC GCTGAGCTAT
CCGGTGCTGT TGTCGAACAC GCGCAGCCTC ACCCTCACCG GCACCTTCTA CGCCAACGAG
GACATGCAGC GCTACAGCCC GCAGAACCTG GCCATCGCTC CCGTCGATAT TGCCTCCAAG
GTGCGCGTGG TCGGCGCCGA AGCGCTCTAT ACGGAAGTGC GTCCGGGTGA GACCCGAAGG
GCATCGCTCG GAATCTATCA GGGCATCGAT GGCGTGGGTG CGAGCAAATC GTTCAGCAAC
AATATCGACC TCGGCTTCCT GCGCACGCGC ATCACCGCGA GCGAAGCGCA TGACCTGCCG
TTCGGCTTCG GCATGGCGAT CTCGGGCGCG GCACAGTACA GTGGCGCCGT GCTGCCTTCC
TCGGAGCAGA TCAGTTTCGG CGGACGTTTC TTCGGTTTAG CGTATCCTGC CGGCGAAGTG
GCGGGCGACC GCGGCTGGGG CATGTCGTTC GAAATCAACC GACTGTTCCA GGCCTCGATG
ACCTACCTCA AGACCGTGCA GCCCTACGTG CTGTTCGACA CCGCGAAGGT GTACTCGAAC
TTCGCTACGA TCATGCACGA CCAACTGGGG TCCATCGCGC TGGGTATCCG CTTCTCCGAC
CGCAAGTACT ACACGCTGGA TCTGGCGCTG GCCCGTCCGG TGGGCGACAA GCCCATCAAC
GCCAACGCCC GCAGCCTGCG CTTCAATGCG GCGTATACGT ATCAGTTTCC GTGA
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| Protein sequence | MRTTTMRLAL ATGVALAGPL SSWAQSSPAQ GNPIDTLPRV DTSRPPEQKI HVQVQRPNPA
LENLLATHLT PSKFQIEGVK ALPFPEIAAH FAPMAGHDVT VAQLLQAASE VTKLYADRGY
PLSFAFVPAQ TFEGGVVRIT VVEGYVARMR IEGKPGPLEA RLRAISKHMM DERPLRRETF
ERVTGVLALQ PGVQITATVQ PPTTTDGASE LVLDVKRQPY TIGTGIEYRS PGVRAVVTGT
LNGLTPLGEQ ISVSTLQPRG RDDEKYYSAT WAQPIGTDGL LAKLTWSHYR GRPENLPLEQ
LGYQSRYLTD AQRLGLSLSY PVLLSNTRSL TLTGTFYANE DMQRYSPQNL AIAPVDIASK
VRVVGAEALY TEVRPGETRR ASLGIYQGID GVGASKSFSN NIDLGFLRTR ITASEAHDLP
FGFGMAISGA AQYSGAVLPS SEQISFGGRF FGLAYPAGEV AGDRGWGMSF EINRLFQASM
TYLKTVQPYV LFDTAKVYSN FATIMHDQLG SIALGIRFSD RKYYTLDLAL ARPVGDKPIN
ANARSLRFNA AYTYQFP
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