| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02594 |
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| Symbol | RSp1087 |
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| ID | 1223399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1379151 |
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| End bp | 1380515 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240952 |
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| Product | outer membrane channel signal peptide protein |
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| Protein accession | NP_522648 |
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| Protein GI | 17549308 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG CCGCCGTCGT TCGCGGTTGG ATGGGCGCGC TCGCGCTGGG CTGTGCCGCC
CTGGCGCCGG CGGCGCACGC GCAGGGCATG CCGGCCGACC AGGCGCTGCA TCTGCTGAGC
GGCAGCCAGC GCGAGATCCG CCTCGGCAAG CCGCTGGAGC GCATCGCCAT CGGCAATCCG
GAGGTGGCCG ATGCGCTGCT GCTCAAGGGG CACGGTGCGG CCGGCAGTCT GCTGATCATT
GCCAAGAAGC CTGGCGCGGC CAACATCATG GTCTGGACGC AGGGCGGCAC GGCCCTCACC
TACAACGTAC AGGTGGATGC CGAGCCGCGC GGCGCCGGCA GTCCCGACCT GGCGGTGCAG
GGCAGCACGG CCGTGCTGAC CGGTCAGGTC AAGGATGTCT ACTCGCTGGC GCGGGCCCGC
AAGTCGGCGG CGGCCGCGGG CGGCGCGGAG CCGCCGAAGG GCGGCAGCGT GATCGACAAC
ACCACCATGG CCGTGCCGGG CACGGTGCAG GTGGATGTGC GCGTGGTGGA GTTCAGCAAG
ACGGTGCTCA AGGAGGCCGG CTTCATCTTC ACGCGCACGC GCGGCGGCTT CACCTTCGGC
AGCTTCTCGC CGTCGTCGCT GACGCAATAC ACGGTGACCC CCAGCAGCCT GACGACGCAA
TCCACCACGC CGATCGGCAC CGCGTTCAAC CTGCTGATCT CATCGTTCAG CAAGGGCATC
TTCGCCGACC TGAGCCTGAT CGAATCGAAC GGCCTGGCGC GCGTGCTGGC CGAACCCAGC
CTGGTGGCGT TGTCCGGCCA GAGCGCCAAC TTCCTGGCCG GCGGCGAGAT CCCGATCCCG
GTGCCGCAGG CGCTGGGCAC CACCACCATC GAGTACAAGC CGTTCGGCAT CGGGCTGACG
GTCTCGCCGA CCATCCTGTC GGAGAACCGC ATCGCGCTGA AGGTGGCGCC GGAGGCCAGC
GATCTCGATT TCAGCCGCGG CGTCACGCTC AACGGCGCCA CCGTGCCGGC CATCGTCACG
CGCCGCGCCG ACACCACGGT CGAGCTCGGC GATGGCGAGA GCTTCGTCAT CGGCGGGCTG
GTCAGCCGGA CCACGCTGTC GAACGTCGAC AAGGTGCCGT TCCTCGGCGA CGTGCCGATC
ATCGGCACGT TCTTCAAGCG GCTGAACTAC AACCAGGAGG AGCGCGAGCT CGTCATCATC
GTGACGCCGC GTCTGGTGCG GCCGATGGCG CGCAACGCGC CGATCGACAA GATGCTGCCG
GGCCAGACCG GGGGGCAGGA CCGGGACAAG GCGGGACTGC CGGTGTGGCA GCCGTTCGTC
CTTGGCGTGA CGGACTCGGC GGCCATGCCG GGGTTCTCGC GGTAA
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| Protein sequence | MTEAAVVRGW MGALALGCAA LAPAAHAQGM PADQALHLLS GSQREIRLGK PLERIAIGNP
EVADALLLKG HGAAGSLLII AKKPGAANIM VWTQGGTALT YNVQVDAEPR GAGSPDLAVQ
GSTAVLTGQV KDVYSLARAR KSAAAAGGAE PPKGGSVIDN TTMAVPGTVQ VDVRVVEFSK
TVLKEAGFIF TRTRGGFTFG SFSPSSLTQY TVTPSSLTTQ STTPIGTAFN LLISSFSKGI
FADLSLIESN GLARVLAEPS LVALSGQSAN FLAGGEIPIP VPQALGTTTI EYKPFGIGLT
VSPTILSENR IALKVAPEAS DLDFSRGVTL NGATVPAIVT RRADTTVELG DGESFVIGGL
VSRTTLSNVD KVPFLGDVPI IGTFFKRLNY NQEERELVII VTPRLVRPMA RNAPIDKMLP
GQTGGQDRDK AGLPVWQPFV LGVTDSAAMP GFSR
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