| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02589 |
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| Symbol | RSp1082 |
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| ID | 1223394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1373634 |
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| End bp | 1374551 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637240947 |
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| Product | lipoprotein transmembrane |
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| Protein accession | NP_522643 |
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| Protein GI | 17549303 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.600145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGTGC GGAAGTTTCC ATTTGCGATG CGCGCCGGCG TGGCCGGCAT GCTGGCCCTG
GCCGCGCTGC TGGCGGGCTG CGGCTCGCTG TCGGGTTCCG AGATGAGCCG CCGCACCGAT
GCGGACATCG AGGTGGCGCG CCAGCGCCAG GCTGACGAGA AGGCCGAGCT CACCAGCCCC
GGCACCTATC TGTCGCTGAT CCGCCGCATG CAGGAGCAGG GCATGTACTA CGCGTCGCTG
GCGCATATCG ACGCCTACGT GCAGCGCTTC GGCCGGACGC CGGACGTGCT GCTGCTGCGG
GCCGACGCGC TGCGCGAGAC CGACCAGCCG GCGGCGGCCG AAGCGGATTA CCGCGCGGTG
GTCGAGGCCA CCTCGGCCCT GGGCGCGGGC ACGCAGGGTG CGCTGCTCAA CGCCAATGCG
TGGCGCGGGC TGGGCATCAC GGCCGGCCGC CAGGGCCGGT TCGCGGAAGC GGTGCGCCGC
CTGCAACTGG CCGCCCGGGG CAACCCGACC GATGCCAGCA CCGAGAGCGA CCTCGGCTAC
GCGCTCATGC GTGCCGGCGA GGTCGAGCAG GCGCGCGTGC CGCTGATGCA GGCCGCGCAG
CTGGACGCGG CCAACCCGAA GATCGCCGGC AACCTGGCGA TCTGGCTGGA CGTCAACGAC
CGCAAGGAGG CCGCGGCCGC GCTGACGGCG CACGCACGCC TGAGCGAGGC CGCGCGCAAG
GCCATCGACG AGGATGCCGC CCGCGTGCGC AGCGCCTGGC GCGACCGGCG CGTGGCCCGC
GACACGGCAC CGCAGCCGGT GCAGCGCGCG GTGGTGGCCA ACCCGGCGCT GATGCCGGCG
GCCGCTGCGC CGCGGTCTTC GGCGCCGCTG GCTTTCCAGC GCGGACGCCT GCTCGACAAC
CTGGAGGCAG CCCAATGA
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| Protein sequence | MNVRKFPFAM RAGVAGMLAL AALLAGCGSL SGSEMSRRTD ADIEVARQRQ ADEKAELTSP
GTYLSLIRRM QEQGMYYASL AHIDAYVQRF GRTPDVLLLR ADALRETDQP AAAEADYRAV
VEATSALGAG TQGALLNANA WRGLGITAGR QGRFAEAVRR LQLAARGNPT DASTESDLGY
ALMRAGEVEQ ARVPLMQAAQ LDAANPKIAG NLAIWLDVND RKEAAAALTA HARLSEAARK
AIDEDAARVR SAWRDRRVAR DTAPQPVQRA VVANPALMPA AAAPRSSAPL AFQRGRLLDN
LEAAQ
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