| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02587 |
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| Symbol | RSp1080 |
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| ID | 1223392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1371600 |
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| End bp | 1373225 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240945 |
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| Product | hypothetical protein |
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| Protein accession | NP_522641 |
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| Protein GI | 17549301 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4655] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.248324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCAGCC TCCTCACCAC GGTCTTCGTC GCGACCCTCG GCCTGACGCT GCTGGTGAGC
GTCGATATCG GCAACGTGTT CTTCACGCAG CGCGCACTGC AGCGCGCGGC GGACATGGCG
GCGATGGCGG CGGCGCAGCG GCTGGACATC CCGACCCAGG TCGCCCAGCA GAGCGTGACG
CAGAACGGCC TGAGCGTCAC GCCCACCGTG GTGCCGGGCG TCTGGAACGC GACGAACACG
GCGGCGGCGC CCTCCTATTT CTGCGCCAGC GGCAGCACCG GCTGCATCGG CACCGTCAAC
GCGGCGCAGG TCACGCTGAC GCAGAACGTG CCGTATTTCT TCTCGGTCGG CCAGCGTACC
CTGACCGCCA CGGCCATCGC CAAGAACACC GCGATCGTGT CGTTCTCGCT CGGGTCGGGG
CTGGCCTCGA CCAATACCGG GCTGCTCAAC TCGGTGCTGG GTGCGCTGCT GGGCAACGGC
AACAGCGCGC TCAACCTGGA CCTGGTGTCC TACCAGGGGC TGGCGAACAC GACGATCCGC
GTGTCCGACC TGATGGCCGC GCTGAACGTG GGCACCGTGC AGCAGTTGAT CGCTGCGCAG
GTCTCGCTCA GCCAACTCGT CAGCGCGGTG GTGTCGGCGG GCGGGCAGAA CGGGCTCACC
GGCGTGTCGG TCGGCACCGT GGTGGCGCCG AACACGCTCG TGCTCGGGGC GCTGCTGCGC
AATACGCTGA TCAACGTCGG CAACAGCACC GGCACCCCCG GTGTCCTGCA GTTCCTGGCG
CAGGCGGGCA ACGACCAGTC TGTGCTGAAT GCGCAGCTCA ACGTGCTGGA CCTGGTGACG
ACGGCCGCGC AGATCGCCAA CAACAAGAAC GCGGTGGCGA TCTCCACCGG CCTGACGCTG
CCCGGCCTGC TGGGGACGAC CCTGAATCTC AAGGTGATCC AGCCGCCGGT CATCGCCATC
GGGCCGCCCG GCAAGGATAC GTCGGGCAAC TGGATGACGC AGGCCTCGGC CGGCCAGGTG
CGGCTGGGCC TCAACGTCAG CGCGAGCGTG CTGGGCCTGG CGACGATCAA CGTGCCGATC
GGTGTCGTCG TGGCAGGCGC CAGCGCGCAC GCTGTCGATG CCTATTGTCC GGTGCCCCGG
GTGAACCTGT CGGCGGATAT CGCGGGGACG ATCTCGCCGG TCTCGTCGTG CATTGCGGCC
GGGGCGGACT CGGTCGCGTC CGGCACCTTG AACTGCGGGT CGGCAAGCGC TGCGCCGTTG
TTGAGCGCGC TGGGGATTCC CGTGGTGTCG ATCTACAGCA ATCCGCCGGC CTCGTCGAGC
GTGTCCTTCG GCAGCGACAC GCCCTACCGC GGCCTGCAGA TCGCGGTGGG GCAGACCCAG
CGCGTGACGG CGACCGGCGG TTTCTTCAGC TCACTCTTGT CGAGCAATAG CAATCTGAAA
GTGACGGTGC TCAATGCGCT TTTGCTTGCT GTGCCCATTT CCGCAGTTTC AGCCGAGCTG
TCGACGGTCG GCTCGATTCT GGACAGTTCG CTGACCCCGG TGCTGGAACT GCTCGGCGTG
CAGCTCGGCT ACGCCGACAT CAAAGTGCTT TCGGTGAACT GCGATGCAGT CGAACTGGTG
TTCTGA
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| Protein sequence | MVSLLTTVFV ATLGLTLLVS VDIGNVFFTQ RALQRAADMA AMAAAQRLDI PTQVAQQSVT
QNGLSVTPTV VPGVWNATNT AAAPSYFCAS GSTGCIGTVN AAQVTLTQNV PYFFSVGQRT
LTATAIAKNT AIVSFSLGSG LASTNTGLLN SVLGALLGNG NSALNLDLVS YQGLANTTIR
VSDLMAALNV GTVQQLIAAQ VSLSQLVSAV VSAGGQNGLT GVSVGTVVAP NTLVLGALLR
NTLINVGNST GTPGVLQFLA QAGNDQSVLN AQLNVLDLVT TAAQIANNKN AVAISTGLTL
PGLLGTTLNL KVIQPPVIAI GPPGKDTSGN WMTQASAGQV RLGLNVSASV LGLATINVPI
GVVVAGASAH AVDAYCPVPR VNLSADIAGT ISPVSSCIAA GADSVASGTL NCGSASAAPL
LSALGIPVVS IYSNPPASSS VSFGSDTPYR GLQIAVGQTQ RVTATGGFFS SLLSSNSNLK
VTVLNALLLA VPISAVSAEL STVGSILDSS LTPVLELLGV QLGYADIKVL SVNCDAVELV
F
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