| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02577 |
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| Symbol | RSp1075 |
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| ID | 1223387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1365261 |
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| End bp | 1366997 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637240940 |
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| Product | activation/secretion protein |
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| Protein accession | NP_522636 |
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| Protein GI | 17549296 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0875463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGG GAAGTTCGGT TTGCCGCCTG GGGGGCGGCA AACGTTTCGT ATGGCTCGGC
GCTTGCCTGC TGCCGATGTC CATGGCCTTG GCGCAGATCG CGCCGGCCGA AGATGCCACG
CAGGAACTGT TGCGGCAGCA GGAACGTGAA CGCGCGCTGC GCCAGCGGCA GGAGTCCAAG
CCGGACGTGC GGCTGGAGCG CGGGGTGGCC GCCGAGACCG GCCGCCTCCC GGCGGACGAG
TCGCCGTGCT TCCGCATCGA CCGCATCACG CTGACGGGGG ACGCCGCCGA GCGCTTCCAG
TGGGCGCTGC CTGCGGCCGA TCCGTCGGAC GATCCGGCCA CCGGCCGATG CCTGGGCACC
GCCGGCATCA ACCTGGTGAT GAAGCGCGTG CAGAACGCCA TCGTCGCGCG CGGTTACGTG
ACCACGCGCG TCCTGGCCGC GCCACAGGAC CTGAAGCAGG GCACGCTTGC CCTGACGCTG
GTGCCGGGGC GCATCCGCGC CATCCGCTTC TCGGACGACA GCAGTCCGCG CGCCACCCGG
TGGAATGCGC TGCCGGCCGC GCCCGGCGAC ATCCTCAACC TGCGCGATAT CGAGCAGGGG
CTGGAGAACT TCAAGCGCGT GCCCACGGCC GATGCCGACA TCCAGATCGC GCCCGCCGAC
GGGCCTGGCG CCACGCCCGG CGAGAGCGAT CTGGTGATCG CCTGGAAGCA GGGCCTGCCG
TTCCGCCTGA ACGTGGCCGC CGACGATTCC GGCAGCAAGT ACACCGGCAA ATACCAGGGC
AGCGTCACGG TGTCGTACGA CCACTGGTGG ACGCTCAACG ACCTGTTCTA CGCCAGCTTC
AATCATGACC TGGGCGGCGG CTACAGCGGC AGCAAGGGCA CGCGCGGCTA CACCGTCCAC
TACGAGGTGC CGTACGACTA CTGGCTGCTC GGCTTCACCA CCAGCAGCTA CGACTACTAC
CAGTCGGTCG TCGGGGCCAA CCAGACCTAC ATCTACAGCG GCACCAGCGA GAACAGCGAG
GTGCGCCTGT CGCGGCTGTT CTACCGCGAC GCCGTGCGCA AGACCAGCGC CTATGTGCGC
GGCTGGGTGC GCAGTTCCGC CAACTTCATC GACGACACCG AGGTCGAGGT GCAGCGCCGC
CGCATGGCCG GCTGGGAAAT CGGCCTGAAC CACCGCGAGT TCATCGGTGC CGCCACGCTC
GACGCGAACG TGGCGTACCG CAAGGGCACG GGGATGCTGT CGTCGCTGCC GGCGCCGGAG
GAGTCGTTCG ACGAGGGCAC CGCCCGCCCG TCGCTGATCA CGGCGGATGC GCAGCTGACG
GTGCCGTTCG CCGTCGCGTC GCAGCGGCTG CGCTACACGA CCGCGTGGCG CGGCCAGTGG
AACCGCACGC CGCTGGTGCC GCAAGACCGC TTCTCCATCG GCGGGCGCTA CACCGTGCGC
GGCTTCGACG GCGAGAACAC GCTGATCGGC GATCGCGGCT GGCTGGTGCG CAACGACCTC
GGCTGGACGC TCGGCAATAG CGGCCAGGAG CTCTATGTGG GCGTGGATTA CGGCGAGGTC
GGCGGGCAAT CCGCGCGCGT GCTGATCGGG CAGCACCTGG CCGGTGCCGT GCTGGGCCTG
CGCGGCGGCT ACAAAGGGCT GTTCTGGGAC GTCTTCATCG GCACGCCGCT CAGCAAGCCC
GAGGGCTTCC GGACCGCGCA TACCACGGCG GGTTTCAACG TCAGCTGGTC GTACTAG
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| Protein sequence | MGRGSSVCRL GGGKRFVWLG ACLLPMSMAL AQIAPAEDAT QELLRQQERE RALRQRQESK
PDVRLERGVA AETGRLPADE SPCFRIDRIT LTGDAAERFQ WALPAADPSD DPATGRCLGT
AGINLVMKRV QNAIVARGYV TTRVLAAPQD LKQGTLALTL VPGRIRAIRF SDDSSPRATR
WNALPAAPGD ILNLRDIEQG LENFKRVPTA DADIQIAPAD GPGATPGESD LVIAWKQGLP
FRLNVAADDS GSKYTGKYQG SVTVSYDHWW TLNDLFYASF NHDLGGGYSG SKGTRGYTVH
YEVPYDYWLL GFTTSSYDYY QSVVGANQTY IYSGTSENSE VRLSRLFYRD AVRKTSAYVR
GWVRSSANFI DDTEVEVQRR RMAGWEIGLN HREFIGAATL DANVAYRKGT GMLSSLPAPE
ESFDEGTARP SLITADAQLT VPFAVASQRL RYTTAWRGQW NRTPLVPQDR FSIGGRYTVR
GFDGENTLIG DRGWLVRNDL GWTLGNSGQE LYVGVDYGEV GGQSARVLIG QHLAGAVLGL
RGGYKGLFWD VFIGTPLSKP EGFRTAHTTA GFNVSWSY
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