Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02396 |
Symbol | RSp1059 |
ID | 1223371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1341353 |
End bp | 1342138 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240924 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | NP_522620 |
Protein GI | 17549280 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.613287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC TGAAAGGAAA AGTCGCCGTC GTCACCGGTG CCGCCAGCGG CATCGGCAAG CAGATCGCCC TCACGCTTGC CCGGGCCGGC GCGGCCATCG GCATCGTCGA CCTGAACGAA GATGGCGCCC AGGCCGCCGC CAAGGAGATC ACCGACGCCG GCGGCAAGGC CATCGGCCTG CGCATGGACG TCACCGACGA ACAGGCGGTC GACATCGGCA TCGACCGCGT GGCGGCCGAA CTGGGCTCGG TCGACATCCT GGTCTCCAAC GCCGGCGTCC AGATCGTCAA CCCGATCGAG AGCTATGCCT TTGCCGACTG GAAGAAGATG CAGGCCATCC ACGTCGACGG CGCCTTCCTG ACCACGCGCG CGGCGCTGCG CCACATGTAC AAGGACAAGC GCGGCGGCGT GGTGATCTAC ATGGGCTCGG TGCACTCGCA CGAGGGCTCG CCGCTGAAGT CGGCCTACGT GGCGGCCAAG CACGCGCTGC TGGGGCTGTC CAAGGTGCTG GCCAAGGAGG GCGCGGCGCA TAACGTGCGC TCGCACGTGG TATGCCCGGG GTTCGTGCGC ACGCCGCTGG TCGACAAGCA GATTCCCGAG CAGGCCAAGG AGCTCGGCAT CAGCGAGGAA GACGTGGTGA AGAAGGTGAT GCTGGGCGGC ACCGTCGACG GCGTGTTCAC GACGGTGGAA GATGTGGCCG AGACCGTGCG CTTCCTGGCG AGCTTCCCCA GCGCGGCGCT GACCGGCCAA TCGTTCGTGG TCAGCCACGG CTGGTTCATG CAGTAA
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Protein sequence | MSDLKGKVAV VTGAASGIGK QIALTLARAG AAIGIVDLNE DGAQAAAKEI TDAGGKAIGL RMDVTDEQAV DIGIDRVAAE LGSVDILVSN AGVQIVNPIE SYAFADWKKM QAIHVDGAFL TTRAALRHMY KDKRGGVVIY MGSVHSHEGS PLKSAYVAAK HALLGLSKVL AKEGAAHNVR SHVVCPGFVR TPLVDKQIPE QAKELGISEE DVVKKVMLGG TVDGVFTTVE DVAETVRFLA SFPSAALTGQ SFVVSHGWFM Q
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