| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02384 |
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| Symbol | RSp1047 |
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| ID | 1223359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1325817 |
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| End bp | 1327466 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240912 |
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| Product | transporter transmembrane protein |
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| Protein accession | NP_522608 |
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| Protein GI | 17549268 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.458603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAG CTGTTCTTCA TCCATTTTTT TCGCGCGAGC GCACCGTCGC CGCGGTTGGA
TTCAACCGCT GGCTGGTACC ACCCGCCGCA CTGGCCATCC ATCTGTGCAT CGGCATGGCC
TATGGTTTTT CCGTCTTCTG GCTGCCGCTG TCGCGGGCGC TGGGCATCAC CCAGTCGCAC
ACCTGCGGCG CTGATGTCTC GCTGATCGCT GAGCTGTTCA CCACCTCGTG CGACTGGCGC
ATTTCCAGCC TCGGCTGGAT GTACACCCTC TTCTTCGTAT TCCTGGGCGC CTCCGCGGCG
CTGTGGGGCG GCTGGCTGGA GCGCGTCGGC CCGCGCAAGG CCGGCGTGGT CTCCGCCGTG
TGCTGGTGCG GCGGCCTGCT GATCTCGGCA TTCGGCGTGC AGACGCACCA GCTGTGGATG
CTGTGGATCG GCTCCGGCGT GATCGGGGGC ATCGGCCTGG GCCTGGGCTA TATCTCGCCC
GTGTCGACGC TGATCAAGTG GTTCCCGGAC AAGCGCGGCA TGGCGACCGG CATGGCCATC
ATGGGCTTCG GCGGCGGCGC GATGATCGGC GCTCCGCTGG CTGACCGCCT GATGAAGCTG
TTTGCCTCGG CCGATTCCGT GGGCGTGTCG CAAACGTTCA TCGTGCTGGC CGCGATCTAC
TTCGTGTTCA TGATGGCCGG TGCCCTGGGC TACCGCGTGC CGCCCGCAGG CTGGAAGCCC
GCCGGCTGGA AACCGTCGCC CGCCAAGGCC AATGACACCA TGGTCACGCA GCGCCACGTG
CACGTCAGCC AGGCCGTCAA GACGCCGCAG TTCTGGCTGA TCTGGGCCGT GCTGTGCCTG
AACGTGTCGG CCGGCATCGG TGTGCTGGGC ATGGCCTCGC CGCTGCTGCA GGAAGTGTTC
GGCGGCAAGC TGCTGGGGGT CACCACCGCG TTCACCGAAC TGACCGCCGC GCAAAAGGGC
CAGATCGCCG CCATCGCCGC GGGCTTCACC GGCCTGCTGA GCCTGTTCAA CATCGGCGGC
CGCTTCTTCT GGGCCTCGCT GTCGGACCGG CTGGGCCGCA AGCTGACCTA CGCCGTCTTC
TTCGCGCTGG GCTTCGTGCT GTACGCCGCG ATTCCCTGGA CTTCGCACAC CAGCAACATC
GCGCTGTTCT CGCTGGCCTT CTGCGTGATC CTGAGCATGT ACGGCGGCGG CTTCGCCACC
GTGCCGGCCT ACCTGGCCGA CATGTTCGGC ACCCAGATGG TGGGCGCCAT CCATGGCCGC
CTGCTGACGG CCTGGTCGAC GGCCGGCATC CTGGGCCCCG TGCTGGTGAA CTACCTGCGC
GAATACCAGA TCGCCCACGG CGTGGCCCGC GCGGCGGTCT ACGACATCAC GATGATGGTG
CTGGCCGGCC TGCTGGTGCT CGGCTTCATC TGCAACCTGC TGGTGCGCCC GGTCGACCCG
AAGCACTTCA TGACCGAAGC ACAGCTGGAC GAGCAGCGCC ACGCCGCAAC CGCCGCGACC
CCGCAAGCCA ACGCGCCGGA AACCTCGCTC GAGTGGCAAG CTCACCCGGG TTCGGCCGTG
GCCGTGGTGC TGGCCTGGGC CGCCGTGGGC CTGCCGTTGG GCTGGGGGGT TTGGATTACA
CTCCAAAAAG CTGCCGTGCT GTTCTCCTGA
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| Protein sequence | MSEAVLHPFF SRERTVAAVG FNRWLVPPAA LAIHLCIGMA YGFSVFWLPL SRALGITQSH
TCGADVSLIA ELFTTSCDWR ISSLGWMYTL FFVFLGASAA LWGGWLERVG PRKAGVVSAV
CWCGGLLISA FGVQTHQLWM LWIGSGVIGG IGLGLGYISP VSTLIKWFPD KRGMATGMAI
MGFGGGAMIG APLADRLMKL FASADSVGVS QTFIVLAAIY FVFMMAGALG YRVPPAGWKP
AGWKPSPAKA NDTMVTQRHV HVSQAVKTPQ FWLIWAVLCL NVSAGIGVLG MASPLLQEVF
GGKLLGVTTA FTELTAAQKG QIAAIAAGFT GLLSLFNIGG RFFWASLSDR LGRKLTYAVF
FALGFVLYAA IPWTSHTSNI ALFSLAFCVI LSMYGGGFAT VPAYLADMFG TQMVGAIHGR
LLTAWSTAGI LGPVLVNYLR EYQIAHGVAR AAVYDITMMV LAGLLVLGFI CNLLVRPVDP
KHFMTEAQLD EQRHAATAAT PQANAPETSL EWQAHPGSAV AVVLAWAAVG LPLGWGVWIT
LQKAAVLFS
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