| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02377 |
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| Symbol | RSp1040 |
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| ID | 1223352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1315837 |
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| End bp | 1318953 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637240905 |
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| Product | putative cation efflux system transmembrane protein |
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| Protein accession | NP_522601 |
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| Protein GI | 17549261 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.127084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAAC GCCTCGTCAC CCTGTGCTTC AACCGGCGCG GCATTGTCGT CCTGGTGTTC
CTGTTCGCGG CGCTCTATGG CTGGCATAGC TGGACGCAGC TGCCGCTGGA GGCCTACCCC
GACATCGCCG ACACGACCTC GCAGGTGGTC ACGCAGGTCA ACGGCCTGGC CGCGGAAGAG
GTGGAGCAGC AGATCACGAT CCCGCTGGAG CGCGAGATCA TGGGCACGCC CGGCATGCAC
GTGATGCGCT CGAAGAGCAC CTTCGGCCTG TCGCTGATCA CGGTGGTGTT CCAGGACGGC
GCCGAAGACT ACTGGTCGCG CCAGCGGCTG CAGGAGCGCA TCAGCGGCGT GTCGCTGCCG
TACGGCGCCC AGCCCGGGCT GGATGCGCTG ACCTCGCCGA TCGGCGAGAT CTTCCGCTAC
ACGCTGCAGT CCAAGACGCG GGACCTGCGC GAGCTGTCCG AGCTGCAGTT CTGGAAGGTC
ATCCCCCGCC TCAAGCAGGT GTCGGGCGTG GTGGACGTGG TCAACTTCGG CGGCATGACC
ACGCAGTTCA TGCTGGAGCT GGATCCGGCC AGGCTGTCCA AGTACAACCT CTCGCTGAAC
CAGATCACGC AGGCCATTGC CGCCAACAAC GCGAACGCGG GCGGCAGCGT CATGCAGCGC
GGCGAGCAGG GGCTGGTGAT CCGCGGCGTG GGCCTGATCC GCAACCTCGA CGACCTGGGC
AACGTCGTCG TCAGCCAGAA GAACGGCGTG CCGGTGCTGG TCAAGGACCT CGGCCGCGTG
GTGCTGGGCA ACCGCGAGCG GCACGGCATC CTGGGCATGG ACAACAACCC GGACACCATC
GAGGGCATCA CGCTGCTGCT CAAGAACGAG AACCCGTCGC GCGTGATGGC CGGCGTGCAC
GACGCCGTGC GCGACCTGAA CGAGCACATC CTGCCCAAGG ACGTGAAGAT CGTGCCGTAT
ATCGACCGCA GCAAGCTGGT CGACGCCACC GTGCATACGG TGGGCAAGAC GCTCATCGAG
GGCATGACGC TGGTGTCGAT CGTGCTGCTG CTGTTCCTGG GCAGCCCGCG CGCGGCGATC
ATCGTGGCCA TCACGATCCC GCTGTCGCTG CTGACGGCGT TCATCCTGAT GCACCACTTC
AAGATTCCGG CCAACCTGCT GTCGCTGGGC GCGATCGACT TCGGCATCAT CGTCGACGGC
GCCATCGTGG TGATGGAGAA CATCCTGCGC CGGCGCGAAG AGGATGCCGA AAGCGAGCTG
CACGGCAACG ACATCCTGGC GGCGGCGCGC CAGGTCACGC GGCCGATCTT CTTCGGCATG
CTGGTCATCA TCATCGCCTA CCTGCCGCTG TTCGCTTTCC AGCGCATCGA GTACAAACTG
TTCTCGCCGA TGGCGTTCGC GGTCGGCTTC GCGCTGTTCG GTGCCTTGCT GGTGGCGCTG
CTGCTGATTC CGGGCCTGGC GTACTGGGCC TATCGCAAGC CGACCAAGGT GTTCGAGAAC
CCGGTGCTGC ACTGGCTGGT GCCGCGCTAC CAGGCGCTGC TGTCCCGGCT GGTGGGCAAG
TCGCGCACGG TGATCGGCCT GGCCGTGGCG ACCCTGGCCG GCGTGGTGAT CCTGGGCGGA
TCGATCGGGC GCGACTTCCT GCCGTACCTC GACGAAGGGT CGATCTGGCT GCAGGTCACC
CTGCCGCCGG GGCTCTCGCT CGATAAGGCG AGCCGGATGG CCGACACGCT GCGCGCGGCG
ACGCTGGAGT TTCCCGAGAT CGAGCACATC GTCACCCAGG TCGGGCGCAA TGACGACGGC
ACCGATCCGT TCACGCCGTC GCACATCGAG AGCGCGGTGA CGCTGCATCC GTATGACGAG
TGGAAGACCG GGCGCGACAA GCAGCAGCTG ATCGCCAAGA TGGCCGAGCG CTTCAGGCAG
CTGCCGGGCA TCGACGTCGG CTTCACGCAG CCGATGATCG ACGGCGTGCT GGACAAGCTG
GCGGGCGCGC ACAGCGACCT GGTGGTCAAG GTCTACGGCA ACGATTTCGG CGAGACGCGG
CAGCTGGCCA CCGAGGTCGA GCATCTGCTG AAGACCGTGC CGGGCGCGCA GGACGTGATC
ATCGACCAGG AGCCGCCGCT GCCGCAGGTG CGCATCGATG TCGACCGCGC GGCCGCCGCC
CGCCTCGGCA TCAACATCGC CGACGTGATG GCGCTGATCC AGACCGGCAT CGGCGGCAGC
CCGGTGACGC AGGTCTTTGT CGAGGAGCGC AGCTACGACG TGGTCGCGCG CTTTGCCGGC
GCGTCGCGCA GCAACCCGGA GGCGATCGGC AATCTCATGC TGACGGCGGC CAACGGCGCG
CATATCGCGC TGGCCCAGAT CGCGAAGATC CGCTTCGCCG AGGGCGAGAC CACCATCACG
CGGGAGATGA ACAAGCGCCA CCTGACGGTG CGCCTGAACC TGCGCGGGCG CGACCTGGCG
TCGTTCCTCG ACGAGGCCAA GCGGCGCATC GACCAGGAGA TCCGCTACGA CCATACGCGC
TACCAGATCG CCTGGGGCGG CCAGTTCGAG AACCAGCAGC GCGCGCAGGC CCGGCTGGCG
GTGATTTTGC CGATGGTGCT GGCGCTGATG TTCGTGCTGC TGTTCGCCGA GTTCAAGAAT
CTGCGGCAGC CGGCGCTGAT CCTCTCGGCG GTGCCGCTGG CGACGCTGGG CGGGCTGATC
GCGCTGCACC TGCGCGGCAT GACGCTGAAC GTGTCGTCGG CGGTCGGCTT CATCGCGCTG
TTCGGGGTGG CGGTGCTCAA CGCGATCATC ATGGTGTCGA ACCTCAACCG CTGGACCCAG
GAGCCCGGCA TCAGCCTGAA GGATGCGGTG GTGGCCGGCG CGCGCGAGCG GATGCGCCCG
GTGCTGATGA CGGCCACCGT GGCGGCGCTC GGCCTGATTC CGGCCGCGCT GGCGCACGGG
CTCGGCAGCG ACGTGCAGCG TCCGCTGGCG ACCGTTGTGG TGGGCGGCCT GGTGACGGCG
ACCGCCCTCA CGCTGGTGCT GCTGCCGGCC TTGTACTACC TGATCGAAGC GCGCGTCGGC
AGACGGCAGA ACGGAAGCGG CCCGGCCGCT GACAAGCCAA TCCAAGGGGA ATCGTGA
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| Protein sequence | MIERLVTLCF NRRGIVVLVF LFAALYGWHS WTQLPLEAYP DIADTTSQVV TQVNGLAAEE
VEQQITIPLE REIMGTPGMH VMRSKSTFGL SLITVVFQDG AEDYWSRQRL QERISGVSLP
YGAQPGLDAL TSPIGEIFRY TLQSKTRDLR ELSELQFWKV IPRLKQVSGV VDVVNFGGMT
TQFMLELDPA RLSKYNLSLN QITQAIAANN ANAGGSVMQR GEQGLVIRGV GLIRNLDDLG
NVVVSQKNGV PVLVKDLGRV VLGNRERHGI LGMDNNPDTI EGITLLLKNE NPSRVMAGVH
DAVRDLNEHI LPKDVKIVPY IDRSKLVDAT VHTVGKTLIE GMTLVSIVLL LFLGSPRAAI
IVAITIPLSL LTAFILMHHF KIPANLLSLG AIDFGIIVDG AIVVMENILR RREEDAESEL
HGNDILAAAR QVTRPIFFGM LVIIIAYLPL FAFQRIEYKL FSPMAFAVGF ALFGALLVAL
LLIPGLAYWA YRKPTKVFEN PVLHWLVPRY QALLSRLVGK SRTVIGLAVA TLAGVVILGG
SIGRDFLPYL DEGSIWLQVT LPPGLSLDKA SRMADTLRAA TLEFPEIEHI VTQVGRNDDG
TDPFTPSHIE SAVTLHPYDE WKTGRDKQQL IAKMAERFRQ LPGIDVGFTQ PMIDGVLDKL
AGAHSDLVVK VYGNDFGETR QLATEVEHLL KTVPGAQDVI IDQEPPLPQV RIDVDRAAAA
RLGINIADVM ALIQTGIGGS PVTQVFVEER SYDVVARFAG ASRSNPEAIG NLMLTAANGA
HIALAQIAKI RFAEGETTIT REMNKRHLTV RLNLRGRDLA SFLDEAKRRI DQEIRYDHTR
YQIAWGGQFE NQQRAQARLA VILPMVLALM FVLLFAEFKN LRQPALILSA VPLATLGGLI
ALHLRGMTLN VSSAVGFIAL FGVAVLNAII MVSNLNRWTQ EPGISLKDAV VAGARERMRP
VLMTATVAAL GLIPAALAHG LGSDVQRPLA TVVVGGLVTA TALTLVLLPA LYYLIEARVG
RRQNGSGPAA DKPIQGES
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