| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02325 |
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| Symbol | RSp0993 |
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| ID | 1223305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1246501 |
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| End bp | 1248153 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637240858 |
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| Product | cytochrome c oxidase subunit transmembrane protein |
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| Protein accession | NP_522554 |
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| Protein GI | 17549214 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.839682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.1031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG TCTCCATCCT TTTGTCGGCC TTCATCCTTT CCGTGGTCGG CCTGCTCATG
TTCATCGTGA GCACCCGCTA TGGGCTGCTG GATGGCTCCC AAGGCGCGGC GGGCATCATC
TTCGGCCGCG ACGAGATCGG CCGGCCCGAA GAGCCCGCGG CGACAGGCGA ACAGCGGACC
GCGCTGGAAG GCATCAGCGC CGCCGCCGAG CCCTCCGCGC CCCCCGCCAC CTCCGACGCA
GACCTGGCCG CCCGCGCGGC CGCCGACCGC TCATCGTCGC TGGTCGTCTT CGTGTTCTTG
TGCAGTGCGA TGGTGTGGTT GCTGGTGGCC TCCCTGGCGG GGCTGACCGC GTCGCTCAAG
CTGCATCTCC CCGATGCGCT TGCCACGCAG GCGTGGCTGT CGTTCGGGCG CATCCGCACC
ATCCACCTGA ATGCGGTGGC CTACGGCTGG GCGCCGATGG CCGGCCTGGG CATTGCGCAG
TTCGTCCTGC CCCGCGTGCT GAAAACCCCG CTGGTGGGCG GAAACTTCGC GGTCCTGGGG
GCGATGATGT GGAATGCCGG CGTCGTTGCC GGCCTGGGCA GCATCGCGGT CGGGCTGTCC
GACGGGCTCG AATGGCTGGA GATTCCCTGG CAGATCGGCG TCCTGTTTGC CGTGGGGGGC
GCCTTGGTCG GCATCCCCCT GGTGCTGACG CTGCTGGCGA CCCGGGTCAG CCATCTCTAT
GTGTCGGTCT GGTACATGGG CTGCGCGCTC TTCTGGTTTC CCGTGCTGTA CCTGGTGGCG
AAGGTGCCCT ATGTGCATTT CGGGGTCGAG CAGGCGACCA TGAACTGGTG GTTCGGGCAT
AGCGTGCTGG GGCTGTTCTA CACGCCGCTC GCGCTGGCCT CCATCTACTA CTTCCTGCCC
AAGATCATCG GCAAGCCGAT CCAGTCGTAC GGCCTGTCGC TGCTCGGGTT CTGGACGCTC
GCGTTCCTGT ATGGGCAGGT GGGCGGCCAC CATCTGGTGG GCGGGCCGGT ACCCGGCTGG
CTGATCACGC TGTCGATCGT GCAGAGCATG ATGATGCTGA TACCGGTCGT CGCGTTCTCG
GTCAATCTGC ATCAGACCAT GCGGGGCCAC TTCAAGGCGC TGCTGTATTC GCCCACGCTG
CGGTTCGTGA CCTTCGGCGG GATGATGTAC ACCCTGAGTT CGGTCCAGGG GTCGTTCGAA
GCGCTGCGCA GCGTCAACGT CATCACGCAT TTCACGCATT ACACGGTGGG CCACGCCCAT
CTCGGGCTGT ATGCGTTCGT CAGCTTCGTC TTCTTCGGCT CGATCTACTT CATCGTGCCG
CGCATCACGC AGCGCGAGTG GCCGTATCCG AGCCTGATCA CGGCGCATTT CTGGTGTGCC
GCCATCGGCA TCGGCATCTA CTTCGTCGCC CTGACCATCG CGGGCACGCT CCAGGGCCTG
ACCATGCTCG ATGCGTCGCG GCCGTTCATC GATTCGGTCA CGGTGACGGT GCCGTACCTG
GAGGCCCGCT CCGTCGGCGG CGCGCTGATG GTGCTGGGCC ACCTGCTGTT CGTCGTCCAC
TTCGCCTGCG TCATCTTCGG GCTGGGCCCG AACCGGGACA AGCCGGCGAT GTTTGCCCTG
GCCGACGTGC CCAAAGCGGG AGCCGGCTCA TGA
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| Protein sequence | MSTVSILLSA FILSVVGLLM FIVSTRYGLL DGSQGAAGII FGRDEIGRPE EPAATGEQRT
ALEGISAAAE PSAPPATSDA DLAARAAADR SSSLVVFVFL CSAMVWLLVA SLAGLTASLK
LHLPDALATQ AWLSFGRIRT IHLNAVAYGW APMAGLGIAQ FVLPRVLKTP LVGGNFAVLG
AMMWNAGVVA GLGSIAVGLS DGLEWLEIPW QIGVLFAVGG ALVGIPLVLT LLATRVSHLY
VSVWYMGCAL FWFPVLYLVA KVPYVHFGVE QATMNWWFGH SVLGLFYTPL ALASIYYFLP
KIIGKPIQSY GLSLLGFWTL AFLYGQVGGH HLVGGPVPGW LITLSIVQSM MMLIPVVAFS
VNLHQTMRGH FKALLYSPTL RFVTFGGMMY TLSSVQGSFE ALRSVNVITH FTHYTVGHAH
LGLYAFVSFV FFGSIYFIVP RITQREWPYP SLITAHFWCA AIGIGIYFVA LTIAGTLQGL
TMLDASRPFI DSVTVTVPYL EARSVGGALM VLGHLLFVVH FACVIFGLGP NRDKPAMFAL
ADVPKAGAGS
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