Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02317 |
Symbol | RSp0985 |
ID | 1223297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 1239838 |
End bp | 1241067 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240850 |
Product | transporter transmembrane protein |
Protein accession | NP_522546 |
Protein GI | 17549206 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.14358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGCCA GTCTCGCGAG CCTGCTGGGC AGCACGATCG AGTGGTACGA CTTCTTCCTG TACGGTGCGG CGTCCGCCCT GGTATTCAAC CAGGTCTTCT TTCCGAAGCT GGGTGCGCTG AGCGGCGCCA TTGCGGCGTT CGGCACGTAC GGGCTGGGGT TCGTGGTGCG CCCGCTCGGC GCGCTCGCAT TCGGCCACTT CGGCGACCGC CTGGGCCGGA AGACCGTGTT GCTGGCCTCG CTGCTGGCAA TGGGGTTGCC GACGGTGCTG ATCGGCCTTC TGCCGTCGTA CGACGCCATC GGCTATCTTG CGCCGCTTCT GCTGATCGTC CTGCGGCTCG TTCAGGGCTT TGCCGTGGGC GGGGAGTGGG GCGCGGTCAT TCTGGCGGTC GAGCACGCTT CGCCGCGTTT CAAGGGGCTG CTGGGCGGGT TGTCGCAGAC CGGGGTGGCG GCGGGGCTGA CCTTGTCGTC GCTTGCCATG GCTGCCGTGA GCGCGATCGG CCACGAGGCG ATGCTGAGCT GGGCGTGGCG GATTCCGTTC GTCGCGAGCG GGCTGCTGGT CGCGCTCGGG TGGCTGCTGC GCCGCAAAGT GGACGAGACA CCCGAGTTCG CCTCGGCCAA GCAGCAGGGG CGGTGCTTGA AATACCCCGT TAGCAACGTC TTCAAGGATC ATGCCGGCGC GCTGCTGAGC GTGGCCGGCG CGCGCGTCGC GGAGATCTCG TTCTTCTACA TCGTGACGGC CTTCACGCTC TGGTACGCGA CGAAGCAGCT CGGCCTCCCC GGTGCCTGGT GCCTCAACGG CGTCACGCTG GGCGCGGCGG CGGCGACGTT CCTGATGCCG CTGTGCGGCA TGCTGGGGGA CCGATGGGGC GCGCGCAGGA TCTATATCGC CGGCATTGTC ACGGCGCTGC TCTGGATCCT TCCGTTCTTC ATGCTGGTGA ACACCCGCGC GATGGTGTGG GTGGTCCTGG CCGAGGCGGT CAGCGTCGTG CTGTCGTTCT CCATGGCGGC CCAGCAGGCC AGTCTCTTTG TGCAGCAGTT TCCGGTGATT GCGAGATATA CCGGTGCATC GCTTGCCGTC AACATCGCCG GGGCATTGGG CGGGCTGGCG CCGATCGTCG CCACTGCGCT GCTCGGGAAC GTGCCGGACG GCGTCACGTA TATTGCGGGC TACGTGGCCG CTTTGGCGGT CATTTCGATC GCCAGCGCGC TACGGCTCAG GAAAGTCTGA
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Protein sequence | MRASLASLLG STIEWYDFFL YGAASALVFN QVFFPKLGAL SGAIAAFGTY GLGFVVRPLG ALAFGHFGDR LGRKTVLLAS LLAMGLPTVL IGLLPSYDAI GYLAPLLLIV LRLVQGFAVG GEWGAVILAV EHASPRFKGL LGGLSQTGVA AGLTLSSLAM AAVSAIGHEA MLSWAWRIPF VASGLLVALG WLLRRKVDET PEFASAKQQG RCLKYPVSNV FKDHAGALLS VAGARVAEIS FFYIVTAFTL WYATKQLGLP GAWCLNGVTL GAAAATFLMP LCGMLGDRWG ARRIYIAGIV TALLWILPFF MLVNTRAMVW VVLAEAVSVV LSFSMAAQQA SLFVQQFPVI ARYTGASLAV NIAGALGGLA PIVATALLGN VPDGVTYIAG YVAALAVISI ASALRLRKV
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