Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02293 |
Symbol | RSp0962 |
ID | 1223274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1214665 |
End bp | 1215213 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637240827 |
Product | putative transcription regulator protein |
Protein accession | NP_522523 |
Protein GI | 17549183 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.40687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCATCG CCTTGCAGGG GCTGCGCCAG CGTCAGCGGC TGTCGCTCGA TGAACTCTCG CGCCGCGCGG GGGTGTCCAA ATCCATGCTA TCGCAGATCG AGCGCAACCT GACCAACCCC ACCGTCGCAG TGCTGTGGCG ACTGGCCAAT GCGCTGGGCG TCAGCCTGAC GGACTTCCTC GCGCAAAGCG CCGGCGAGCC GGCAGGCAAC GGCATCACCG TGGTGCCGCC GCATGCCATC CCTGCGCTGA AAAGTCCGGA TACGCGATGC GACCTGCGTA TCCTGGGGCC GATCGATCTG GCCGGGCGCT TCGAGTGGTA CGAGCTGACG ATCCAGGCGG GCGGCGTGCT GTCTTCCGAG CCGCATGAGG CCGGCACGCA TGAGCACCTG TCGGTGCTGA GCGGATCGAT GACAGTGCGC ACCGACGCCG ACGAGAAGAA GCTGCGGCAC GGCGAGACCG CGCGCTACCG CGCCGATGTC GCGCACGTGA TCGCCAATGG CGGCAAGACC ACGGCCACGG CGCTGCTGGT GGTCGTGCAT CCCGCCTGA
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Protein sequence | MGIALQGLRQ RQRLSLDELS RRAGVSKSML SQIERNLTNP TVAVLWRLAN ALGVSLTDFL AQSAGEPAGN GITVVPPHAI PALKSPDTRC DLRILGPIDL AGRFEWYELT IQAGGVLSSE PHEAGTHEHL SVLSGSMTVR TDADEKKLRH GETARYRADV AHVIANGGKT TATALLVVVH PA
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