| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02227 |
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| Symbol | RSp1668 |
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| ID | 1223980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 2080680 |
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| End bp | 2081834 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637241531 |
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| Product | sigma-54 interacting transcription regulator protein |
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| Protein accession | NP_523227 |
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| Protein GI | 17549887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTGA GCGAAGCCTT CGCAGACGAT CGCGCAGTCA CCACCGGGCG CCTGCCCTGC
CCTCCCAGGC TGGCAGACCG CGCCGATACC GACGCCATCG ACGTGTTCGG CGATGCCGCG
CACCTGACCG CGTTCGCCAA TCCCCCCGCT GTCTCCGTAT CCGCGCCTGT TGTCGCCGAC
CCCGACTTCG GCCACCTGTA CGGCCATTCA GCCGTCATGC GGACGCTGTA TGGCCAGATC
GGCAAGGTGT CCGGCACGCT GGCAACCGTG CTGATCATCG GAGAATCGGG CACCGGCAAG
GAACTGATCG CGCGCACCGT GCACGACATG AGCCCGCGTG CTGACCAGGC CTTCATCGCC
GTCAACTGCG GCGCGATCTC GCCCAACCTG ATCGAATCGG AGCTGTTCGG CCACGAGAAG
GGCAGCTTCA CCGGCGCGCT CCAGCGCCAC ACCGGCTATT TCGAGCAGGC CTGCAACGGC
ACGATCTTCC TCGACGAGAT CACCGAGATG CCGGTGGAGA TGCAGGTCAA GCTGCTGCGC
GTGCTGGAGA CCGGCACGTT CATGCGCGTG GGCGGCACGG AGCCGATCGA GACCCGCGCG
CGCATCATCG CCGCGACCAA CCGCAATCTG CCGGAGGCCG TGTCCGACGG CACCTTCCGC
GAAGACCTGA TGTATCGGCT GGCGGTGGTG CCGCTGCACG TGCCGCCGCT GCGCGACCGC
GACGAAGACA TCGAAGCGTT GGCCCACCAT TTCCTGGCGC AATTCAACGC CGCGCACCAG
ACCGACAAGA CCTTCGCGCG CTCCGCCCTG TCGGCGCTGC GCCAGCACCC TTGGCCGGGC
AACGTGCGCG AGCTGCGCAA CGCCGTGCAG CGCGGCTACA TCCTGGGCGA AAAGACGGTG
GAGCTCGCCA TGCCGCTGGT CTCGCTGCGC AGCCCGTCGC GCCCGTCGGT GAAGGAAGGC
GTGCTCAATG TCTCGGTGGG CGTCACGCTG GCCGAAGCCC AGCGCGTCAT GATCCTCGCC
ACGCTGGAGC ATTTTCGGGG CGACAAGCGC CAGGCCGCCA AGACCCTCGG CGTCAGCCTC
AAGACGCTCT ACAACCGGCT CGACCTGTAT CACAGCCAAA GCCAAGGCAC CGAGGCCGCC
GGGCTGCCCG CGTAG
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| Protein sequence | MSLSEAFADD RAVTTGRLPC PPRLADRADT DAIDVFGDAA HLTAFANPPA VSVSAPVVAD
PDFGHLYGHS AVMRTLYGQI GKVSGTLATV LIIGESGTGK ELIARTVHDM SPRADQAFIA
VNCGAISPNL IESELFGHEK GSFTGALQRH TGYFEQACNG TIFLDEITEM PVEMQVKLLR
VLETGTFMRV GGTEPIETRA RIIAATNRNL PEAVSDGTFR EDLMYRLAVV PLHVPPLRDR
DEDIEALAHH FLAQFNAAHQ TDKTFARSAL SALRQHPWPG NVRELRNAVQ RGYILGEKTV
ELAMPLVSLR SPSRPSVKEG VLNVSVGVTL AEAQRVMILA TLEHFRGDKR QAAKTLGVSL
KTLYNRLDLY HSQSQGTEAA GLPA
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