Gene RS02156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS02156 
SymbolRSp1599 
ID1223911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp2006641 
End bp2008092 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content72% 
IMG OID637241462 
Productputative outer membrane drug efflux lipoprotein 
Protein accessionNP_523158 
Protein GI17549818 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.910807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC CCACGCTGCG CGGCACCGCG CTGGCCGCAT CGCTGACCAC GCTGCTGACT 
GGATGCTCGC TAGCGCCGCC CTACGCGCGC CCGGCCATGG ACGTGCCCGC CCACTGGCAG
ACCGAGGCCC CCTGGCGCGC CGCGCAACCC GCCGACGACG CGCCCAAGGG CCCATGGTGG
CAGCGCTTCA ACGATCCGCA GCTCGACCGG CTGATGGAGC AGGCGCTGCA CGAGAACCAG
TCGCTGAAGG TGGCGGTGTC CAACCTGGAA CAAGCGCAGG CGCTGACGCG CGTGGCCCGC
GCCGGCCTGC TGCCGCAGGT GACGGCTTCG ACCAGCGGCG CGCGCCTGCG CACCTCCGCC
GACCGTCCGC TGTCGTCGTA CAGCAGCCCC ACCATGTCGA CCGTGCAGAA CGACTTCGTG
GTGCGCGCGG ATGTCAGCTA CGAAGCCGAC CTGTTCGGCC GCGTGCGCGG CAACATCGCC
AATGCCGCCG CCAGCGAGGA GCAGGCCGCG GCCAACCTGG AGAATGTCCG CCTGCTGCTG
GCCGCGCAGG TCGCCACCAC CTGGTACAGC CTGCGCGAGA CCGATGCCGA GATCGACGTG
GTGCAGCAGG GCCTGGCCTT GCAGCGCAAG GCGCTCGATT TCGTCGCCTC GCGCCATCAG
GACGGCGTGG CCTCGGGGCT GGATCTGGCG CAACAGCAGG CGCTGGTGGA CAGCACCGCC
ACGCAGGCCG AGCTGCTGCA GAAGCAGCGC ACCCAGTACG AGCACGCGCT CGCCACGCTG
ATCGGCACGC CGGCGCCGGC CTTCCATATC GCACCGGCGC CGCTCGCCGG GCAGCCGCCC
GTCATTCCCG TCGCCCTGCC TTCCGATGTC ATCGAGCGCC GGCCCGACGT GGCCGCCGCG
GAACGCGGTG CCGCCGCCGC CAACGCCTCG GTGGGCGTCG CGCGCGCGGC GTTCTTCCCC
AGCATCATGC TCAATGGCGG CGCCGGCTGG GAAAGCCGCG ACCTGGCGCT GCTGTTCTCG
GCGCCGTCGC TGCTGTGGTC GTTCGGCACG CAGATCGCGC AGACGGTGTT CGACGCCGGC
CGCACGCGGG CGCGGGTCGA CTTCGCCAAT GCGGGCTACC AGGGCGCGAT CGCCAACTAC
CGGCAGGCCG TACTCGGCGC GCTGCAGGAA GTGGAGGATG GGTTGTCCGG CCTGCAGGCG
CTCGATCGCG CCGCGGCGCA GGCGCGCGCG TCGGTGGAGA GCGCGCGCAA GGTGTACGAC
ATCGCCAGCG CGCGCTACGA AGGCGGCCTG GCGACTTCGC TCGATGTGAT CGCGGCCCAG
CAGTCGCTGC TCAACAACCA GCGCACGGCG GTGCAGATCC TGGGCCAGCA GCTGACGACC
AGCGTCTTCC TCGTCAAGGC GGCCGGCGGT GACTGGAGCC ACCCCGCCGA GCCGCCCACG
GCCCGGCGCT AG
 
Protein sequence
MNTPTLRGTA LAASLTTLLT GCSLAPPYAR PAMDVPAHWQ TEAPWRAAQP ADDAPKGPWW 
QRFNDPQLDR LMEQALHENQ SLKVAVSNLE QAQALTRVAR AGLLPQVTAS TSGARLRTSA
DRPLSSYSSP TMSTVQNDFV VRADVSYEAD LFGRVRGNIA NAAASEEQAA ANLENVRLLL
AAQVATTWYS LRETDAEIDV VQQGLALQRK ALDFVASRHQ DGVASGLDLA QQQALVDSTA
TQAELLQKQR TQYEHALATL IGTPAPAFHI APAPLAGQPP VIPVALPSDV IERRPDVAAA
ERGAAAANAS VGVARAAFFP SIMLNGGAGW ESRDLALLFS APSLLWSFGT QIAQTVFDAG
RTRARVDFAN AGYQGAIANY RQAVLGALQE VEDGLSGLQA LDRAAAQARA SVESARKVYD
IASARYEGGL ATSLDVIAAQ QSLLNNQRTA VQILGQQLTT SVFLVKAAGG DWSHPAEPPT
ARR