| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02133 |
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| Symbol | RSp1577 |
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| ID | 1223889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1979976 |
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| End bp | 1980647 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637241440 |
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| Product | amino-acid transmembrane ABC transporter protein |
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| Protein accession | NP_523136 |
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| Protein GI | 17549796 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGTTTG ATTTCGCCGT CGCCGCACAG GCTGTCCCCG TGCTGCTCCG CGGCCTGAAG
GTCACGGCCG TCGTCAGCAC CATCGGGATT CCGCTGGGCG TGCTCGCCGG CACACTCGCG
GCCTATGCCT CGCGGCTGCG CTCGCTGGCG CCCGCCTGCC TTGCGCGCAG CTATGTGGCG
ACGGTCAGGA ACGTACCGTA CCTGATCCTG GTCTATCTGT CGTTCTTCGG GCTGCCCAAG
CTGGGCGTGG CGGCTTCGGC GATGGCGGTC GCGATCGGCT GCACGGCGCT GTACACGGGC
GGCTACTTCT GCGAAATCCT GCGCGCCGCG CTGCACAGCG TGCCGCGCGG CCAGTCCGGC
GCCGCGCTGT CGCTGGGCAT GTCGCGCTGG CAGGTGCAGC GGTACATCGT CGGCCCGCAA
TTGCTCGGTT TCCTGATCCC GCCCACGACC AGCCTGGTGA TCATGATGTT CAAGGATTCA
GCGATCTTCT CCGTGATGAG CCTGCCGGAA ATGACCTACC AGAGCAATCT GCTGACGGCC
AACACCTTTG CGTACACGGA AATCCTGGCG GCCACCGCCG CGATCTACTG GCTGACCAGC
GTGCTGCTGG CCGCGGCGGG CCGCTCGCTG GAGCACCTTG CGCGCCGCCG CTGGCTGTCG
CCCCAAACCT GA
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| Protein sequence | MPFDFAVAAQ AVPVLLRGLK VTAVVSTIGI PLGVLAGTLA AYASRLRSLA PACLARSYVA
TVRNVPYLIL VYLSFFGLPK LGVAASAMAV AIGCTALYTG GYFCEILRAA LHSVPRGQSG
AALSLGMSRW QVQRYIVGPQ LLGFLIPPTT SLVIMMFKDS AIFSVMSLPE MTYQSNLLTA
NTFAYTEILA ATAAIYWLTS VLLAAAGRSL EHLARRRWLS PQT
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