Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02063 |
Symbol | RSp1395 |
ID | 1223707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1757704 |
End bp | 1758378 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637241258 |
Product | putative transcription regulator transcription regulator protein |
Protein accession | NP_522954 |
Protein GI | 17549614 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0495626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.936254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCAAC CCGCCGACAC CGCGGCCCCC GTCCGCCCCA AGCGCAAGAA CGATCCCGAA CGCACCCGCG CCGACATCCT CGCCGTCGCC ACCGAGGAGT TCGCCGAGCA GGGCTTCAGC GGCGCGCGCG TCGACATGAT CGCCGAGCGC ACGCGCACCA CCAAGCGCAT GATCTATTAC TACTTCGGCA GCAAGGAAGG GCTGTACCTG GCCGTGCTGG AGAAGAAATA CGAAGAGATC CGCGCGTTCG AGAGCTCGCT GCAGCTCTCC GACATGGACC CCGAGGCGGC CATGCGCGCG CTGATCGGCG CCACCTTCGA CTACGAGGAA AGCCACCCGG AGTTCGTCCG GCTGGTGGCG GTGGAGAACA TCCACAACGC GCGGCACCTG GCGCAATCGA AGACCATCGC CAATCTGAAC GTGACCATCG TCGAGACCAT CCAGTCGCTG CTGGAGCGCG GGCGCGCGGC GGGCCGGTTC CGCGCCGACG TGCAGGCGCT GGACCTGCAC CTGCTGATCA CGTCGTTCTG CTTCTTCCGG GTGTCCAACC GCGCCACGCT GGAGACGGCC TTCGGCCAGA AGCTGGGCAC GCCCAAGACC CGGGCGCGCC ACAAGCAGAT GCTGTGCGAT GCCGTCATCC GCTACCTGGA GGGCGGCGGC CCCGCCACCG CCTGA
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Protein sequence | MAQPADTAAP VRPKRKNDPE RTRADILAVA TEEFAEQGFS GARVDMIAER TRTTKRMIYY YFGSKEGLYL AVLEKKYEEI RAFESSLQLS DMDPEAAMRA LIGATFDYEE SHPEFVRLVA VENIHNARHL AQSKTIANLN VTIVETIQSL LERGRAAGRF RADVQALDLH LLITSFCFFR VSNRATLETA FGQKLGTPKT RARHKQMLCD AVIRYLEGGG PATA
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