| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02062 |
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| Symbol | RSp1396 |
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| ID | 1223708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1758401 |
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| End bp | 1759726 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637241259 |
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| Product | putative transporter transmembrane protein |
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| Protein accession | NP_522955 |
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| Protein GI | 17549615 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000104941 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.781434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCA ACAAGGAAAC GCTGCCGCTG GCGGCATGCG GCACGTCCAT CGGCGACAAG
ATCCGCGCGG CGCTTGCCGT CGGCCGCGTG CGCTGGAGCA TGCTGGCGCT GGTGTTCTTT
GCCACCACGC TCAACTACAT CGATCGGGCG GCGCTCGGTG TGCTGCAGCC CATCCTTTCC
CAGGCCATGC ACTGGACGGC GGAGGACTAC GCCAACATCA ACTTCTGGTT CCAGGTCGGC
TATGCGATCG GGTTTGCCGC GCAGGGCCGC TTCATCGACA AGGTGGGCGT GCGGCGCGCC
TTCCTGCTGG CGGTGCTGCT GTGGAGCGTG GCGGCCGGCG CGCACGGGCT GGTGTCGTCG
GCGGCCGGCT TCATGGTCTG CCGCTTCTTC CTGGGCCTGA CCGAGGCGGC CAACTACCCG
GCGTGCGTGA AGGCCACGCG GCTGTGGTTC CCGGCCGGCG AGCGCGCCAT GGCCACCGGC
ATCTTCAACG CGGGCACCAA CGTCGGCGCC ATGCTCACGC CGCTGATGCT GCCGCTGATC
CTGCAGGTGT GGGGCTGGCG CGCGGTGTTC TTCGTGGTGG CGGCGCTGGG CATCGTCTGG
GTGGTGTTCT GGCTGCGCAA CTACTTCAAC CCGGATGCGC ATCCGGGCGT GGGCGCCGCG
GAGCTGGCCT ACATCCGCGA AACCGCCGAG CCGCCGGCGC AGCGGGTGCC GTATGCGCGC
ATCCTGCGCA TGCGCGGCAC CTGGGCGTTC GCGCTGGCCT TTGCGATCAC CGCGCCGGTG
TTCTGGTTCT ACCTGTACTG GCTGCCCCCG TTCCTGAACC AGCAGTACAA GCTGGGCATC
AGCGTCACGC AGATCGGGCT GCCGCTGCTG GTGATCTACT TCACGGCGGA CATCGGCAGC
ATCGCGGGCG GGGCGCTGTC GTCGTGGATG ATCGGGCGGG GCATGGCGGC GGTGCGCGCC
CGGCTGCTGT CGATGCTGAT CTGCGCGCTG TGCATCGTGC CGGTGGTGCT CGCGGTGTCG
GCCGACAGCC TGTGGGAAGC GGTGATCGCC ATCGCGCTGG CGGTGGGCGC GCACCAGGCC
TGGACGGCCA ACATCTGGAG CCTGGTGATG GACTACACGC CCAAGCAGGT GGTCAGTTCG
GTGTTCGGCT TCGGCGGCAT GGTGGGCGCC GTCGGCGGGA TGTTCATGAC ACAGCTGGTC
GGCTATGTGC TGACCGTCAC GCACAACCGC TACGAAGTGC TGTTCATCAT GATCCCCAGC
CTGTACTTCA TCGCGCTGAC GTGGCTGCAT TTCATGGCGC CGCGCCGGGT GGAGCAGGAC
GCCTGA
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| Protein sequence | MSINKETLPL AACGTSIGDK IRAALAVGRV RWSMLALVFF ATTLNYIDRA ALGVLQPILS
QAMHWTAEDY ANINFWFQVG YAIGFAAQGR FIDKVGVRRA FLLAVLLWSV AAGAHGLVSS
AAGFMVCRFF LGLTEAANYP ACVKATRLWF PAGERAMATG IFNAGTNVGA MLTPLMLPLI
LQVWGWRAVF FVVAALGIVW VVFWLRNYFN PDAHPGVGAA ELAYIRETAE PPAQRVPYAR
ILRMRGTWAF ALAFAITAPV FWFYLYWLPP FLNQQYKLGI SVTQIGLPLL VIYFTADIGS
IAGGALSSWM IGRGMAAVRA RLLSMLICAL CIVPVVLAVS ADSLWEAVIA IALAVGAHQA
WTANIWSLVM DYTPKQVVSS VFGFGGMVGA VGGMFMTQLV GYVLTVTHNR YEVLFIMIPS
LYFIALTWLH FMAPRRVEQD A
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