| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02042 |
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| Symbol | RSp0067 |
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| ID | 1222615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 76980 |
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| End bp | 77876 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637239926 |
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| Product | transmembrane ABC transporter protein |
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| Protein accession | NP_521628 |
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| Protein GI | 17548288 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACA CCCTTCCGAT CGGCCATTGG GTCGACCAGG CAGTCCACTA CCTTCTCGAT
CACGACGCGG CAGCGTTCGA CACGGTAGGC CGCGCCATCG ATGGGCTTGC AGCGCTGGTC
GAACGCAGCC TGCAGGCCGT GCCGATGTGG ATGATGATGG CGTTCTTCAT CGGCATCGGG
CTCTGGCGCG TCGGCTGGCG CTTCGCGCTC TTTACCGCTG CGTCGCTTTT CCTTATTTCC
GCCACCGGGT TCTGGGACCA GACGATCGTC ACACTGGGCC TGACCTTATC GTCGACCATC
ATCAGCCTCG CGCTCGGTGT TCCGCTTGGC ATCTGGGCGG CCAGGAGCAG GGTCGTTTCG
GCCGTCGTGC GGCCGATCCT CGATCTGATG CAGACGATGC CCGCATTCGT CTATCTGATT
CCGGCTGCCA TGCTGTTCGG CCTGGGCCGC GTGCCGGGCA TTCTCTCGAC CGTGATCTTT
GCTATGCCGC CGGCAGTCCG CCTGACCAGC CTCGGCATCC GCCAGGTCAA CATGGAGCTG
GTTGAAGCCG GTCTGGCGTT CGGCTGCACG CCACGGCAAC TGCTGTACAA AGTGCAGATT
CCGAACGCGC TGCCGTCGAT CATGCAAGGC GTGAACCAGA CCATCATGAT GGCGCTGTCG
ATGGTCATCA TCGCGTCGAT GGTGGGCGCT GGTGGCCTGG GCAATGAAGT GCTCGCCAGC
ATTCAGCGGC TGGATATCGG GCTCGGGTTC GAAAGCGGTT TGTCCGTGGT GCTGCTGGCC
ATCATCCTGG ACCGCATCAC CGAGAGCTTC GGCCGTGCGC CCGGCACACA GAAGGCCGCA
ATGTTCTCCG GACTGCGACA CCTCTTCAAC GCCAAAGCAG CGCCCGTACA AACCTGA
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| Protein sequence | MSDTLPIGHW VDQAVHYLLD HDAAAFDTVG RAIDGLAALV ERSLQAVPMW MMMAFFIGIG
LWRVGWRFAL FTAASLFLIS ATGFWDQTIV TLGLTLSSTI ISLALGVPLG IWAARSRVVS
AVVRPILDLM QTMPAFVYLI PAAMLFGLGR VPGILSTVIF AMPPAVRLTS LGIRQVNMEL
VEAGLAFGCT PRQLLYKVQI PNALPSIMQG VNQTIMMALS MVIIASMVGA GGLGNEVLAS
IQRLDIGLGF ESGLSVVLLA IILDRITESF GRAPGTQKAA MFSGLRHLFN AKAAPVQT
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