Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02034 |
Symbol | RSp0059 |
ID | 1222607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 67080 |
End bp | 69005 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637239918 |
Product | hypothetical protein |
Protein accession | NP_521620 |
Protein GI | 17548280 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.365168 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCCGG CCTTTCTGAT TACCGCGCTG CTGTGGCTGT CGGTGGCGGG CCTCGTGTTT GCGGTCGCGA AGCGCGCGTC GTACTGGCGG CTGGGGCGTG CCACTGCGCC CGGGGCGTTC GGCATTGCGA ACCTGTTCAC GATTCCGAAG CGCTACTTTG TCGACCTGCA CCACGTGGTG GCCCGCGACC CGTACATCGC CAAGACCCAT GTGGCGACCG CCGGCGGCGC GATTGCTGCA CTCGCGCTGG TGTTCGTCAA CTACGGCTTT GCGATCTATT CGCCCTGGCT CGACAAGCTG ATCTTTATCG CAGCGCTGGC CATGCTGATT GGCGCGGTGT TCGTATGGCG TCGTCGTGCA GCGAAAGACG TGCCCGCACG TCTGTCACGG GGTCCGTGGA ATACGCTGCC GTGGCTGCTC GGCTCGTTTG CGCTTGGCCT TGTGCTGTTC GTGGTCGTGC CAGCAGGGGC GATGTCGGGC GCGTTTGCCG TGCTCTGCGC ATTACTGATC GGCATCGGTG CGTTTGCGAT GACGTTCGGC GCGGCGAAGG GCGGCCCGAT GAAGCATGCG ATGGCGGGTC TGCTGCATCT CGCCTTCCAT CCGCGTCAGG AGCGTTTCGC CGGCACACCT GAAGCGTTTA CCGGCGGCGG CACCGCGACA CCGCCCACCG CACTGAAACT CCCCGACATC GCGCACCAGG AGTACGGTGT TGCCAAACCG GTCGAGTTTC GCTGGAACCA GCTGCTGAGC TTTGATGCCT GCGTGCAGTG CGGCAAGTGT GAGGCGGCTT GCCCGGCGTT CGCATCAGGT CAGCCGCTGA ACCCGAAGAA ACTGATCCAG GATCTGGTCG TCGGGATGGC GGGCGGCACC GATGCCGCCT ATGCGGGCAG CCCCACGCCA GGTATCGCGG TCGGTCAGCA TCGTGGCGAG CCGAATGGCT CGATCGTGTC TGGGCTGATT GAAGCGCAGA CGCTGTGGTC GTGCACAACC TGCCGCGCCT GCGTGCAGGA GTGCCCGATG CTGATCGAGC ACGTGGATGC CATTGTTGAC ATGCGGCGCA ATCAAACCCT GGTGCATGGC ACGGTGCCGG GCAAGGGGCC TGAAGTGCTC GCCAACCTGC GCGAGACCGG CACCATGGGC GGTTATGACA CCGCTGCGCG CTACGACTGG TCGGTCGATC TGAACGCCCC CATTGCGCAG GCCGGCAAGC CGGTTGACGT GCTCTTCGTT GCAGGTGAGG GCGCATTTGA GATGCGCTAC CAACGTACGC TGCGCGCGTT CGTCAAGGTG CTGAACAAGG CGGGCGTCGA CTATGCCGTC CTCGGCAATG TTGAAACGGA TACGGGTGAC ATCGCACGCC GGCTTGGTGA CGAGGCGACG TTTCAGCAGA TGGCCAAGCG CCTGATCGGC ACGCTGTCGA CGCTGTCTTA CAAGCAGATC GTCACTGCCG ACCCGCACGT GATGCACAGC CTGCGCAACG AATACCGCGC GCTGGGTCTG CGCGTGACCG TCAAGCACCA CACAACCTAT CTGGCGGAGC TTGCCGCCAG CGGAAAGATC ACGCCAAAGG CGGTCGACGC ATTGCGCGAG AAGCGCACGA CCTATCACGA CCCGTGCTAC CTCGGCCGCT ACAACGGTGA GACAGACGCC CCGCGCAAGC TTCTCAAGAC GATCGGTATC CAGGTGGTCG AGATGGAGCG CAACGGGATG CGTGGCCGCT GTTGCGGCGG CGGTGGCGGT GCGCCGCTGA CCGACATCCC CGGCAAGCAG CGCATTCCCG ATATCCGCAT TGCCGATGCG CGTGCCGTCA ACGCAGAGGT TGTCGCGGTT GCCTGCCCGA ACTGCACGGC GATGCTCGAA GGCGTGGTCG GCCCGCGCCC CGACGTGCTC GATGTGGCTG AACTCGTTGC GGCGTCGCTG GAGTGA
|
Protein sequence | MNPAFLITAL LWLSVAGLVF AVAKRASYWR LGRATAPGAF GIANLFTIPK RYFVDLHHVV ARDPYIAKTH VATAGGAIAA LALVFVNYGF AIYSPWLDKL IFIAALAMLI GAVFVWRRRA AKDVPARLSR GPWNTLPWLL GSFALGLVLF VVVPAGAMSG AFAVLCALLI GIGAFAMTFG AAKGGPMKHA MAGLLHLAFH PRQERFAGTP EAFTGGGTAT PPTALKLPDI AHQEYGVAKP VEFRWNQLLS FDACVQCGKC EAACPAFASG QPLNPKKLIQ DLVVGMAGGT DAAYAGSPTP GIAVGQHRGE PNGSIVSGLI EAQTLWSCTT CRACVQECPM LIEHVDAIVD MRRNQTLVHG TVPGKGPEVL ANLRETGTMG GYDTAARYDW SVDLNAPIAQ AGKPVDVLFV AGEGAFEMRY QRTLRAFVKV LNKAGVDYAV LGNVETDTGD IARRLGDEAT FQQMAKRLIG TLSTLSYKQI VTADPHVMHS LRNEYRALGL RVTVKHHTTY LAELAASGKI TPKAVDALRE KRTTYHDPCY LGRYNGETDA PRKLLKTIGI QVVEMERNGM RGRCCGGGGG APLTDIPGKQ RIPDIRIADA RAVNAEVVAV ACPNCTAMLE GVVGPRPDVL DVAELVAASL E
|
| |