Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02032 |
Symbol | RSp0057 |
ID | 1222605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 64420 |
End bp | 64953 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239916 |
Product | hypothetical protein |
Protein accession | NP_521618 |
Protein GI | 17548278 |
COG category | [R] General function prediction only |
COG ID | [COG1719] Predicted hydrocarbon binding protein (contains V4R domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.198538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCTC AACTGCCGAT CAACGTCGAC CCCAATACCG GCGTCTGGAC CACCGATGCG CTGCCGATGT TGTACGTGCC ACGCCACTTC TTCACGAACA ACCACACGGC TGTCGAAGAG GCGCTGGGGC GCGATGCGTA TGCGGAGATT CTCTACAAGG CCGGCTATAA GTCCGCATAC CACTGGTGCG ACAAGGAGGC CAAGTTGCAC GGCCTTGGCG GGATGGCCGT GTTCGAGCAT TACCTGAAGC GGCTGTCGCA GCGTGGGTGG GGTCTGTTCT CGATCCTGGA GGCGGACCCG GCAAACGCGC GCGCCAAGAT CGAACTGTGT CACTCGTCGT TCGTGCTCGC GCAGCCGGGC AAGGAAGGCA AGCTCTGCTA CATGTTCGCC GGCTGGTTTG CGGGGGCGAT GGACTGGGTC AACGACACGA CGCCGGAAGG CAAAGGCGCG CCCCGCGCGC AATCAAAGGA AGTGCAGTGT GCGGCGGAAG GCCACGATCA CTGCATCTTC GAGGTGTCCC CGATCGTGCA TTGA
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Protein sequence | MQPQLPINVD PNTGVWTTDA LPMLYVPRHF FTNNHTAVEE ALGRDAYAEI LYKAGYKSAY HWCDKEAKLH GLGGMAVFEH YLKRLSQRGW GLFSILEADP ANARAKIELC HSSFVLAQPG KEGKLCYMFA GWFAGAMDWV NDTTPEGKGA PRAQSKEVQC AAEGHDHCIF EVSPIVH
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