Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02029 |
Symbol | RSp0054 |
ID | 1222602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 60513 |
End bp | 61544 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637239913 |
Product | transcriptional regulator transcription regulator protein |
Protein accession | NP_521615 |
Protein GI | 17548275 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.130887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCG ACCGAACTGC GTCGCTGCAG CATTTCGCGT TCATGCCGCT ACCCAACTTC ACGATGATCG CGTTCACCAA CGCCATCGAA GTGCTGCGCA TGGCGAACTA TCTCAGTGGC CAAGAGCTGT ACCGGTGGTC CATCGTCAGC CCGGAGGGCG GGCCCGTAAT GGCCAGTAAC GGATTGGTGA TCGACACGCA GTCCGTGGGC GCCATCGATC GGCCGGACAT CGTCTTCGTC TGTGGTGGTA TCGATGTTCA GCGCGCAACA ACCACCGAGC ATCTCTCCAC ACTGCGGCGC GCCGCACGTG ATGGCATCGT TCTCGGGAGC CTGTGTACCG GCACGTATGC GCTTGCCCGG TCGGGGCTGC TGTCCGGCTA TGCGTGCGCC ATCCATTGGG AAAACATGTC GGCGCTCAAA GAGGAGTTTC CCGAGACGCG CTTCCTCAAG GAACTGTTTG TGATTGATCG GGACCGCATC ACGTGCACCG GTGGCGTGGC ACCGCTCGAC ATGATGCTGA ACCTGATCGC CAAACGCGTG GGCACGGCGC GGGTCACACA GATTGCCGAG CAGTTCATTG TCGAGCACGT GCGGGATACG GGCGCACAGC AGAAGATGCC GCTGGTGGCT CGGCTCGGCT CGGCCAATAA GTCGCTGTTC GAAGTCATCT CGCTGATGGA GAACAACATC GAGGAGCCGC TCTCGCGCGA AGAGCTGGCA CGGCTGGCAA GCATGTCGCA ACGCCAATTG CAGCGGCTGT TTCGCGACCA TCTCGGGATG ACCCCGACGC ACTACTACCT CACGCTGCGC CTGCGCCGCG CGCGGGAACT GCTGCTGCAG ACGGACATGT CCATCATGCA CATCACGATG GCGTGCGGCT TTCAGTCGGC CTGCCATTTC AGCAAGAGCT ACCGCGACGC ATTTGGTGTC GCGCCCACGC GCGAGCGCAG GGCACAGGCG GCACCATTGG CCCGCCCCGC GGCTCCAAGC GGAGCATCTG CATTCTCGTC TTCGGCGATG TACGCCGCTT AG
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Protein sequence | MSSDRTASLQ HFAFMPLPNF TMIAFTNAIE VLRMANYLSG QELYRWSIVS PEGGPVMASN GLVIDTQSVG AIDRPDIVFV CGGIDVQRAT TTEHLSTLRR AARDGIVLGS LCTGTYALAR SGLLSGYACA IHWENMSALK EEFPETRFLK ELFVIDRDRI TCTGGVAPLD MMLNLIAKRV GTARVTQIAE QFIVEHVRDT GAQQKMPLVA RLGSANKSLF EVISLMENNI EEPLSREELA RLASMSQRQL QRLFRDHLGM TPTHYYLTLR LRRARELLLQ TDMSIMHITM ACGFQSACHF SKSYRDAFGV APTRERRAQA APLARPAAPS GASAFSSSAM YAA
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