| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS02026 |
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| Symbol | RSp0051 |
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| ID | 1222599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 56288 |
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| End bp | 57436 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637239910 |
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| Product | porin signal peptide protein |
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| Protein accession | NP_521612 |
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| Protein GI | 17548272 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.555277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG TCGCGCTTGG TTCGGGTATT GCACTGCTGT TTTCCGCACC CGCCTTCGCA
CAAAGCAGCG TCACGCTCTA CGGCGTGATC GACGAAGGCA TCAACTACAC GAACAACGTT
GGCGGAAAGA GCCTGGTCGA AATGGCCAGC GGTTTTGCGC AAGGCAGCCG CTGGGGGCTG
AAGGGCGCCG AAGACCTCGG GGGCGGCACC AAGGCCGTGT TCCAGCTTGA AGGCGGGTTC
AACGCTGATA CCGGCAAGGC CGGACAAGGC GGTCTGCTGT TCGGGCGTCA GGCATATGTC
GGTGTTGCCG ACAATCGGTT CGGCACCGTC ACGCTCGGGC GGCAGTATGA CTCGGTGATC
GACTATCTGT CGCCCACCAC GGCTGCCGGA AACTGGGGCG GCACCATGTT CGGCCACCCG
TACGACAACG ACAACTTCAT CTACTCGTTC CGCGTCAACC ATACTGTCAA ATACACGAGC
CCGGTGTTCT CCGGGTTCCA GTTTGGCGGC ACTTACAGCT TTAGCAACGA CACGAGCTTT
GCAAAGAACC GCCAGTACAG CGCGGGGATG CAATACACGA ATGGCGGGCT GTTGCTGGCA
GCGGCGTATC TGCAGGCAGA TAACCCCTCG TCCACGGCGG GCGGCGCCAT CAACAACGGC
GGCGACCAGA ACTTCCTGGC CAACCGTCTG CGCATCTTCG GTGCCGGCGT CAATTACACG
TTCGGCGCAT CGACGGTGGG TTTGGCCTAC TCCAACTCCA ACCTCAACCA GCCGCAATCG
ACCGAGTACA TCTCCGGGTC GATCCTGCCC GCTGGCGGGA CGTTGAGCTC GCTGCGGTTC
CAGAACATCG AGGCGAACTT CAAATACCAG TTCACGCCGG CGTTCTATGC GGGTGTGCTG
TACACGCTCA CGTTGGAGAG CTTCCATGCG TCGTCGGGTG ACGCCAAGCC GAAGGTCCAT
GCCTTCGGGG TGATGGCGGA CTACAACTTC TCCAAGCGCA CGGACGTCTA CTTCCAGGCG
GCCTATCAGC GTGTTGCCGG TGGCAAGACC GGTACGGCAC TGGACCTGGC TGATTTGCCC
GGCGCGGCAA ACGCCTCGTC CACGGCGAAC CAGTTCCAGG CCCGCATCGC GCTTCGCCAC
AAGTTCTGA
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| Protein sequence | MKKVALGSGI ALLFSAPAFA QSSVTLYGVI DEGINYTNNV GGKSLVEMAS GFAQGSRWGL
KGAEDLGGGT KAVFQLEGGF NADTGKAGQG GLLFGRQAYV GVADNRFGTV TLGRQYDSVI
DYLSPTTAAG NWGGTMFGHP YDNDNFIYSF RVNHTVKYTS PVFSGFQFGG TYSFSNDTSF
AKNRQYSAGM QYTNGGLLLA AAYLQADNPS STAGGAINNG GDQNFLANRL RIFGAGVNYT
FGASTVGLAY SNSNLNQPQS TEYISGSILP AGGTLSSLRF QNIEANFKYQ FTPAFYAGVL
YTLTLESFHA SSGDAKPKVH AFGVMADYNF SKRTDVYFQA AYQRVAGGKT GTALDLADLP
GAANASSTAN QFQARIALRH KF
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