Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS02013 |
Symbol | RSp0038 |
ID | 1222586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 44239 |
End bp | 44649 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637239897 |
Product | putative 4-hydroxybenzoyl-COA thioesterase protein |
Protein accession | NP_521599 |
Protein GI | 17548259 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGC ACTTCGAGCG CGCCGCGCGC ATCCGCTTCG GCCACTGCGA TCCGGCCGGC ATCGTGTATT TCCCGCAATA CCTGGTGCTG TTCAACGGCC TGGTCGAGGA TTGGTTCACC GACGGCCTGG GCATCTCGTA CGCCGACATG CTCGGCCCGC GCCGCATCGG GCTGCCGATC GTCAAGCTGC ACTGCGAATT CAGCGCCATC AGCCGCATGG GCGATGACGT GCAGCTCAAG CTGCGGCTGG AGCGGCTGGG CAATGCGTCG CTATCGCTGG CCCTGGACTG CTGGGCCGGC GACCAGCAAC GCGTGCGCTC GCAGCAGGTG CTGGTGTTCA CCGATCTCAA TACGCATCGT GCCATCGCGG TGCCGCCGGA TGTGCGGCAG GCGCTGGCCG CGTGCGCCTG A
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Protein sequence | MTAHFERAAR IRFGHCDPAG IVYFPQYLVL FNGLVEDWFT DGLGISYADM LGPRRIGLPI VKLHCEFSAI SRMGDDVQLK LRLERLGNAS LSLALDCWAG DQQRVRSQQV LVFTDLNTHR AIAVPPDVRQ ALAACA
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