| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01988 |
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| Symbol | RSp0016 |
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| ID | 1222645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 20385 |
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| End bp | 21182 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637239875 |
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| Product | amino-acid ATP-binding ABC transporter protein |
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| Protein accession | NP_521577 |
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| Protein GI | 17548237 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.302252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAGC TCGCATCCAT TTCCAAGCGC TTCGGCGGCC TGTCGGTCCT GCAGGACGTC
AACATCGAGG TGCCGCAGGG CACCATCTTC GGTCTGATCG GCCCCAACGG CGCCGGCAAG
ACGACGGTGT TCAACCTGAT CACCGGCCTG CTGGAGCCGA CCGGCGGCAC GCTGACCTTC
GGCGGCACCA GCCTGGTCGG CAAGAAGCCG CACCAGATCA CGCAGATGGG CATCGCCCGC
ACGTTCCAGA ACATCCGCAT CTTCAAGGAG ATGACGCTGC TGGAGAACGT CGTGGTCGGC
ATGCATCGGC ATCTGGACTA CGGCGCGCCG GGCCTGCTGC TGTCGCTGCC CGGCTACCGC
GCCGCCGAGC GCCGCGCGCG CGATCGCGCG CTGGAGCTGC TGTCGTGGGT CAAGCTCGAC
CACAAGGCGG GCGACATCGC CGACAACCTC TCCTATGGCG ACCAGCGCAA GCTCGAGCTC
GCGCGGGCGT TGGCCACCGA GCCGAAGCTG CTGCTGCTCG ACGAGCCCGT CGCCGGCATG
AACACCGGTG AGAAGGTCGA TCTGATGGCC GAGATCGAGA ACATCCGGGC GCGCGGCTAC
ACCATCTTCA TGATCGAGCA CGACATGCGC TTCGTGATGG GCCTGTGCGA GCGGATCGCC
GTGCTGAACT TCGGCCGCAT CATCGCCGAA GGGCCGCCCG AGGCGATTCG CAACAACCCG
CAGGTGATCG AGGCCTACCT GGGCCGCGAC GACGATGACG GCGAAGGCGG TGCGGCCGCG
CAGGAGGTGA CGGCATGA
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| Protein sequence | MLKLASISKR FGGLSVLQDV NIEVPQGTIF GLIGPNGAGK TTVFNLITGL LEPTGGTLTF
GGTSLVGKKP HQITQMGIAR TFQNIRIFKE MTLLENVVVG MHRHLDYGAP GLLLSLPGYR
AAERRARDRA LELLSWVKLD HKAGDIADNL SYGDQRKLEL ARALATEPKL LLLDEPVAGM
NTGEKVDLMA EIENIRARGY TIFMIEHDMR FVMGLCERIA VLNFGRIIAE GPPEAIRNNP
QVIEAYLGRD DDDGEGGAAA QEVTA
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