| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01985 |
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| Symbol | RSp0013 |
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| ID | 1222642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 17329 |
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| End bp | 18489 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637239872 |
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| Product | amino acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_521574 |
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| Protein GI | 17548234 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.222636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA TCATCAAACG GCTGCTGGTG ACGGCAGCGG CCGCGGGGGC GGCAATGGCG
GCGGGCACGG CGTCCGCGGC CCAGGACATC AAGATCGGCG TGGCCGAGGC GCTGTCGGGC
GGTGCCGCCC AGTACGGCGC GGCCATCCGC AACGGCTTCC AGCTGGCCGC CGACGAGATC
AACGCCGGCG GCGGCATCAA CGGCAGCAAG ATCGCGCTGG TGATCGAAGA CGAGCAGGGC
AAGAAGGAAG AGGCCATCAA CGTCTTCAAG AAGCTGATCT TCCAGGACAA GGTGGCGCTG
GTGTTCGGGC CCACGCTGTC CAACTCGGCG CAGGCGGCCG ACCCGATCGC GCAGGGCGCC
AAGACCGTCG TGTTCGGCAC CTCCAACACC GCCGACGGCA TCACCAGCAT CGGCGACCAC
GTCTTCCGCA ATTCCGTGAC CGAAGCCGAC GTGCTGCCGG CCACCATCCA GACCGTGGTC
AAGAAGGCCG GCGTGAAGAA GGTCGCGGTG CTGTACGGCA ACGACGACGT CTTCACCAAG
AGCGGCTACG ACAACTTCAA GAAGGCCCTC GAAGACCTGA AGATCCCGGT CACCGCCACC
GAGACCTTCG CCAAGGGCGA CGTGGACTTC AAGGCCCAGC TCACCAAAAT CAAGGCGACC
AATCCGGATG CGATCGTGCT CTCCGCGCTG ATCGCCGAGG GTGGTCCGAT CATGGTGCAG
GCGCGCCAGC TGGGCCTGAA CGTGCCCATC ATCGGCGGCA ACGGCATGAA CTCGGTCAAG
GTGTTCGATC TGGCCCGCGA CAAGTCCGAC AACCTCTGGG TGGGCAGCCC GTGGTCGATC
GAGAACCACA CGCCCGAGAA CAGCAAGTTC ATCACCGCCT ACACCGCCAG GTACAAGGCT
GCCCCGGACC AGTTCGCGGC CCAGGCGTAT GACGCCATGC ACATCGCGGC CCAGGCGCTG
AAGACGGTCA AGTTCAGCGG CAACCTGGAA GCGGACCGCA AGGCCATCCG CGATGCGCTG
CCGGCGGTCA AGCACACCGG CGCCACCGGC GCGTTCGCTT TCCGCCAGGT GACGGCGCGC
GGCAAGCCGG CCGGCTACGA CGCGGTGCAG ACGCCGATCG TCAGCGTGAC CAAGGCGGGC
AAGTACACGA TCGAGAAGTA A
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| Protein sequence | MQKIIKRLLV TAAAAGAAMA AGTASAAQDI KIGVAEALSG GAAQYGAAIR NGFQLAADEI
NAGGGINGSK IALVIEDEQG KKEEAINVFK KLIFQDKVAL VFGPTLSNSA QAADPIAQGA
KTVVFGTSNT ADGITSIGDH VFRNSVTEAD VLPATIQTVV KKAGVKKVAV LYGNDDVFTK
SGYDNFKKAL EDLKIPVTAT ETFAKGDVDF KAQLTKIKAT NPDAIVLSAL IAEGGPIMVQ
ARQLGLNVPI IGGNGMNSVK VFDLARDKSD NLWVGSPWSI ENHTPENSKF ITAYTARYKA
APDQFAAQAY DAMHIAAQAL KTVKFSGNLE ADRKAIRDAL PAVKHTGATG AFAFRQVTAR
GKPAGYDAVQ TPIVSVTKAG KYTIEK
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