Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01962 |
Symbol | RSp0746 |
ID | 1223053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 935708 |
End bp | 936181 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637240606 |
Product | hypothetical protein |
Protein accession | NP_522307 |
Protein GI | 17548967 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0416888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGTT TCGAACCCAG CCTGCTCGAT AAGCTCTTCG ACGACGAGCC GCATGCGCCC TTGCCGACGG CTCTGCGGCA GCTTTCGCTG GAAGAGCTCA AGAGCACGGT GGCGCGCGAT ATCGAGTCCT TGCTCAATAC GCGCATCGTC TTTGAAGAGG ACGACCTGCA GAGCCTGCCC GAATGCAAGC GGTCGCTGCT GACCTACGGG CTGAACGATT TCGCGGGCCT GAGCCTCGCC AGCTTCTACG ACCGCAATTA CATCTGCCAG TCGCTCACCA AGGCGATCGA GCGGCACGAG CCGCGGCTGC AGCACGTCAG TGTCTCGCTT GAAATCAACG AGCGGGCGAC CAACGCGCTG TGCTTCGGCA TCACTGCGGT CTTGCTGGTC GGGCCGGCGC GCGAGCCCGT GAGCTTTGAT GCGATGCTGC AGCCGTCCAC GCTGCGGTAT TCCGTCTCGC GCGGGCGCGG CTGA
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Protein sequence | MKGFEPSLLD KLFDDEPHAP LPTALRQLSL EELKSTVARD IESLLNTRIV FEEDDLQSLP ECKRSLLTYG LNDFAGLSLA SFYDRNYICQ SLTKAIERHE PRLQHVSVSL EINERATNAL CFGITAVLLV GPAREPVSFD AMLQPSTLRY SVSRGRG
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