Gene RS01962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01962 
SymbolRSp0746 
ID1223053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp935708 
End bp936181 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content63% 
IMG OID637240606 
Producthypothetical protein 
Protein accessionNP_522307 
Protein GI17548967 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0416888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTT TCGAACCCAG CCTGCTCGAT AAGCTCTTCG ACGACGAGCC GCATGCGCCC 
TTGCCGACGG CTCTGCGGCA GCTTTCGCTG GAAGAGCTCA AGAGCACGGT GGCGCGCGAT
ATCGAGTCCT TGCTCAATAC GCGCATCGTC TTTGAAGAGG ACGACCTGCA GAGCCTGCCC
GAATGCAAGC GGTCGCTGCT GACCTACGGG CTGAACGATT TCGCGGGCCT GAGCCTCGCC
AGCTTCTACG ACCGCAATTA CATCTGCCAG TCGCTCACCA AGGCGATCGA GCGGCACGAG
CCGCGGCTGC AGCACGTCAG TGTCTCGCTT GAAATCAACG AGCGGGCGAC CAACGCGCTG
TGCTTCGGCA TCACTGCGGT CTTGCTGGTC GGGCCGGCGC GCGAGCCCGT GAGCTTTGAT
GCGATGCTGC AGCCGTCCAC GCTGCGGTAT TCCGTCTCGC GCGGGCGCGG CTGA
 
Protein sequence
MKGFEPSLLD KLFDDEPHAP LPTALRQLSL EELKSTVARD IESLLNTRIV FEEDDLQSLP 
ECKRSLLTYG LNDFAGLSLA SFYDRNYICQ SLTKAIERHE PRLQHVSVSL EINERATNAL
CFGITAVLLV GPAREPVSFD AMLQPSTLRY SVSRGRG