Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01949 |
Symbol | RSp0759 |
ID | 1223066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 957153 |
End bp | 958166 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240619 |
Product | hypothetical protein |
Protein accession | NP_522320 |
Protein GI | 17548980 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.532888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTCT CCACCGAATT CGACACCATC CAGGAAGCGC GGCGCTTCGA CGACCCCTCG CTCGATCAGG GCGACTGGGT GACCGAGATC AAGGAGGCGG ACTGGCGCGC CGTCGTCTCG GAAAGCACGG CGTTGCTGCA GAAGCGCACC AAGGACCTGC GCCTGGCCGC GTGGCTGACC GAGGCGCTGT CCAAGGAGCG CGGCTTCGCC GGCCTGCGCG AGGGCTACGA GCTGATCGCG GGGCTGTGCG AGCAGTATTG GGAGCACCTC TTCCCGCTGC CCGAGCCGGA TGATCCCGAG GCGCGCACCG GCAGCATGGC GTGGCTGGCG GGGCGCTCCA GCCAGCTGAT CCGCGAGGTG CCGCTGGTGG AGGCGGGCAA CGGCGGCTTC AACTATGTCG ACTGGGAGGT CGCCACCAAC CTGATCGAGG CGATCCGGCG CGATCCGGAC CAGGCGGATG AGCTGTCGCG CGGCAAGGTC ACGCAGGATC AGTTCGAGGC GGCGCGCCGC GCGTCGTCTT CGGCGTTCTA CACGGCGCTG TACAACGACG TGGTGGGTTG CGGCGCGGCG CTGCTGCGGC TGGAATCCGT GCTGGACGGG CGCGCCGGGG ATCATGCGCC GAGCTTCCGC GCCGCGCGCG AGGCCTTGCA GGCAGTCCGC GCCCTGGTCG AGCGTTTCGG CGGCAAGACG GAAACCAAGC CCAGCGCGGT CGAGCCCAAG GCCACCACCG CGCCGCAGCA GACCGCCCAG CCCGTCGCCG AGGCCGTGCC CGATACCGTG GTCGGCCCGA TCCGCACGCG CGCCCAGGCG CTGAACCAGT TGCGCGAAGT GGCTGAGTTC TTCCGCCAGA CCGAGCCTCA CAGCCCGGTG GCCTATCTCG CCGCACGCGC GGCCAAGTGG GGCGATATGC CGCTGCACGC CTGGCTGCGC GCGGTGGTCA AGGACGATGC GACGCTGTCG CAGATCGAAG AACTGCTGGG GTTGGGCGAT TCGCCGGCGG ATGACGCGAG CTGA
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Protein sequence | MLFSTEFDTI QEARRFDDPS LDQGDWVTEI KEADWRAVVS ESTALLQKRT KDLRLAAWLT EALSKERGFA GLREGYELIA GLCEQYWEHL FPLPEPDDPE ARTGSMAWLA GRSSQLIREV PLVEAGNGGF NYVDWEVATN LIEAIRRDPD QADELSRGKV TQDQFEAARR ASSSAFYTAL YNDVVGCGAA LLRLESVLDG RAGDHAPSFR AAREALQAVR ALVERFGGKT ETKPSAVEPK ATTAPQQTAQ PVAEAVPDTV VGPIRTRAQA LNQLREVAEF FRQTEPHSPV AYLAARAAKW GDMPLHAWLR AVVKDDATLS QIEELLGLGD SPADDAS
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