Gene RS01949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01949 
SymbolRSp0759 
ID1223066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp957153 
End bp958166 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content70% 
IMG OID637240619 
Producthypothetical protein 
Protein accessionNP_522320 
Protein GI17548980 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03363] type VI secretion-associated protein, ImpA family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.532888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCT CCACCGAATT CGACACCATC CAGGAAGCGC GGCGCTTCGA CGACCCCTCG 
CTCGATCAGG GCGACTGGGT GACCGAGATC AAGGAGGCGG ACTGGCGCGC CGTCGTCTCG
GAAAGCACGG CGTTGCTGCA GAAGCGCACC AAGGACCTGC GCCTGGCCGC GTGGCTGACC
GAGGCGCTGT CCAAGGAGCG CGGCTTCGCC GGCCTGCGCG AGGGCTACGA GCTGATCGCG
GGGCTGTGCG AGCAGTATTG GGAGCACCTC TTCCCGCTGC CCGAGCCGGA TGATCCCGAG
GCGCGCACCG GCAGCATGGC GTGGCTGGCG GGGCGCTCCA GCCAGCTGAT CCGCGAGGTG
CCGCTGGTGG AGGCGGGCAA CGGCGGCTTC AACTATGTCG ACTGGGAGGT CGCCACCAAC
CTGATCGAGG CGATCCGGCG CGATCCGGAC CAGGCGGATG AGCTGTCGCG CGGCAAGGTC
ACGCAGGATC AGTTCGAGGC GGCGCGCCGC GCGTCGTCTT CGGCGTTCTA CACGGCGCTG
TACAACGACG TGGTGGGTTG CGGCGCGGCG CTGCTGCGGC TGGAATCCGT GCTGGACGGG
CGCGCCGGGG ATCATGCGCC GAGCTTCCGC GCCGCGCGCG AGGCCTTGCA GGCAGTCCGC
GCCCTGGTCG AGCGTTTCGG CGGCAAGACG GAAACCAAGC CCAGCGCGGT CGAGCCCAAG
GCCACCACCG CGCCGCAGCA GACCGCCCAG CCCGTCGCCG AGGCCGTGCC CGATACCGTG
GTCGGCCCGA TCCGCACGCG CGCCCAGGCG CTGAACCAGT TGCGCGAAGT GGCTGAGTTC
TTCCGCCAGA CCGAGCCTCA CAGCCCGGTG GCCTATCTCG CCGCACGCGC GGCCAAGTGG
GGCGATATGC CGCTGCACGC CTGGCTGCGC GCGGTGGTCA AGGACGATGC GACGCTGTCG
CAGATCGAAG AACTGCTGGG GTTGGGCGAT TCGCCGGCGG ATGACGCGAG CTGA
 
Protein sequence
MLFSTEFDTI QEARRFDDPS LDQGDWVTEI KEADWRAVVS ESTALLQKRT KDLRLAAWLT 
EALSKERGFA GLREGYELIA GLCEQYWEHL FPLPEPDDPE ARTGSMAWLA GRSSQLIREV
PLVEAGNGGF NYVDWEVATN LIEAIRRDPD QADELSRGKV TQDQFEAARR ASSSAFYTAL
YNDVVGCGAA LLRLESVLDG RAGDHAPSFR AAREALQAVR ALVERFGGKT ETKPSAVEPK
ATTAPQQTAQ PVAEAVPDTV VGPIRTRAQA LNQLREVAEF FRQTEPHSPV AYLAARAAKW
GDMPLHAWLR AVVKDDATLS QIEELLGLGD SPADDAS