| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01923 |
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| Symbol | RSp0784 |
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| ID | 1223091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 986616 |
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| End bp | 987593 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637240644 |
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| Product | putative omega-3 fatty acid desaturase transmembrane protein |
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| Protein accession | NP_522345 |
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| Protein GI | 17549005 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00198957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGACCA CGCGTAACGC AGACCGCGAG GCCTTCCTGA GCTACGCGCC GATCCGGCTG
ACGCAGGAGC AGAAGCGCGC GCTCACCAGG AAGCGGCCGG TGCGCTTCGT CATCCAGTTC
ACCGCGCTGG CGGCGCTGTA TGCCGCGCTG GCCAGCGTCG GCATGCTGGT GGACCACCCG
GCGCTGTGGG TCCCGATCTG GATCGTGCTG GGGGCCATGC TGGGGGGGCT CAATCTGGTC
GGGCATGAAT GCGTGCATTC CTCGTTCTCG GGGTCGCGCT GGCTGAACCG CCTGGCCGGC
TCGCTCTTCA TGGCGACCAA CTTCCTCAAC TTCACGCTGC ATCGTGGCTA CCATCTGAAG
CACCACGCCC ACACCATGCA GGAGGGCGAC ACCCAGGAAG AGATCGGCCT CTACGGCTAC
CGCAGCCGCG CCGAGTACCT CAAGGGTCTG CTGTCGTGGT CCACGATCTT CAACTCGTTC
TTCTACAACG AGTGGAAGTA CAGCGTGCTG GCGTTCTTCG GCCGGCGCAC CGCGTTCTTC
AACACCAAGA CATCCGACCT GGCTGCCGTG AAGACGGACT TCATCGTGAT GCTGCTGTGG
TGCGCAGCCG TGGCCACGTT CACCTGGAAT GCGCCGGAAA TCGCGGTCAA GACCTTCCTG
GTGCCGGTCT GCGTGTTCTT CCCGCTCATC CTCTACCTGA TCAGCCTGCC CGAGCACTAC
AAGGTCGACG CGGGCGGCAA TGCGCTGGAG AACACCCGCA CGGTCCGGTC GAGCTGGCTG
GTGCGCCAGA TCTTCTGGAA CATCAATTAC CACACGGCCC ACCATGCGTT TCCCTATGTG
CCGTTCTACA ACCTGCCCAA GGCGCACAAG CTCCTCGAGA AGCAGGTGAA GTACAGCGAG
GCTTCCTACC TCGGCTTTCA TCTCAAGACC TTCCGGGATC TGCGCGGCGC GCCGGCGGTC
GAGCGGGAAC GCGCATGA
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| Protein sequence | MPTTRNADRE AFLSYAPIRL TQEQKRALTR KRPVRFVIQF TALAALYAAL ASVGMLVDHP
ALWVPIWIVL GAMLGGLNLV GHECVHSSFS GSRWLNRLAG SLFMATNFLN FTLHRGYHLK
HHAHTMQEGD TQEEIGLYGY RSRAEYLKGL LSWSTIFNSF FYNEWKYSVL AFFGRRTAFF
NTKTSDLAAV KTDFIVMLLW CAAVATFTWN APEIAVKTFL VPVCVFFPLI LYLISLPEHY
KVDAGGNALE NTRTVRSSWL VRQIFWNINY HTAHHAFPYV PFYNLPKAHK LLEKQVKYSE
ASYLGFHLKT FRDLRGAPAV ERERA
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