| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01920 |
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| Symbol | RSp0787 |
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| ID | 1223094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 989841 |
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| End bp | 991520 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240647 |
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| Product | putative transmembrane protein |
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| Protein accession | NP_522348 |
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| Protein GI | 17549008 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.467911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0185745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA GCCGAGCCGA AACGCTCACG CTGACACAAC GCCTGCTGGA CCGCGAAGCG
GCCTGCGACG GCAGCGTGGC CTATCGCTTT GTCACCCACG ACGACCGCCA GCGCCTGGAG
TGGTCGTACG CCACCCTGGT CACCCATGCG AAGCGCCTGG CCGCCGCCCT GCAGCACCGG
CGCTTGCAGC GGGAGCGGGT GCTGATCCTC TGCGCGGTGG GTGAGGAATA CACCTCCGTC
TTCTTCGCAT GCCTGCTGGC GGGCGCCGTC GCGGTGCCCT GCACGCCGCT CAGGGGCATG
CGCCATCGCA CGAAGATCGT CGAGATCATC CGCAGCTGCG CGCCGCGGCT GGTGGTGTGC
GACGAAGCCT CGATGCAGCC GCTGGCGGCG CTCCTGCAGT CCGCTGGGCT GCACGATGTC
GAGCGGGTTG CCCCGGCCGG CCTGGCCGCC GAAAACCATG CGTGGCAGCC GCCGGACATC
ACCTCCAGCG ATATCGCGCT GCTGCAGTAC ACCTCGGGCT CGACCAGCGA TCCCAAGGGC
GTGGTGGTCA CGCATGCCAG CATCATGGCG AACCTGGCCG GCATCGAGCA GAAGTTCGGC
CTCGGCCCGG CCTCGCGCGG CATGGTGTGG CTGCCGCCGT ACCACGACAT GGGCCTCATC
GGGGGCGTGC TGAGCCCGGT CTACACCGGT TACCCGATCA CCTTGCTGTC GCCGCTGCTG
TTCATTCAGA AGCCGGTGCG CTGGCTGCGG CTCATTTCGC AGTACCGCAT CACCACCAGC
GGCGGCCCCA ATTTCGGCTA CCAGGCCTGC GTGGAGCGCG TGGACGACAG CGAATGCGCC
GGGCTGGACC TGAGCACGTG GGAACTGGCC TTCAACGGCG CCGAGCGGGT CAACGCGCAG
ACGCTGGAGC GCTTCACCCG CAGGTTCGCG CCTTATGGTT TTCGGGGCGC CGCGCATTAC
CCGACGTACG GCATGGCGGA ATCGACGCTG ATGATCTCGG GCGGGGCGCG GGGCGCGGGC
TACAAGGTCC TGCCCGAGAT TGCCGACAGC CAGCAGGGGG CGCAGTTCCG CGACGCGGTG
TCTTGCGGCA GCGCTCTCGA CGGGCATGCG CTGCTGGTCG TCGATCCGGC GTCGCGCCGG
CCGGTGGCGG ACGGGGCGAT GGGCGAGGTG TGGGTCAGCG GCCCCAGCGT GGCCGCCGGC
TACTGGGGCC ACCCCAGCGA GGCCTTCCAC GGCCGGGTGG AGGGCAGGGC GGGCCGCTTT
CTGCAGACCG GCGACCTTGG CGTGCTGCGG GACGGCGAAC TCTACCTCCT CGGGCGGATG
AAGGAGGTCA TCATCATCCG TGGCGCCAAC TTCTTCCCCA GCGACCTGGA GAACGCCATC
CGCGGCGCGC ACGAGGCCCT CAACCCGGAA GGCGTGGCCG TGTTTTCCCA CGCGGGCGAG
GGGGACGAAT CGATCGTCGT CATGGCCGAA CTGCGGCGCG GCACCCGGGA CACCCCGCCC
GAGGACATCA AGGCCCGCAT CAGCGCGGCG CTGGCGAGCG AGTTCGATCT GCGCCCGAGC
GACGTGGTCC TGCTCCCGAT CGGCGGGATC CTGCGCACCT CCAGCGGCAA GCCCATGCGC
ATGAAGATGA AGCAGCTGTA TCTGCAGCAG CGTGCCCCGG AGCCCGAGCC GGTGGCCTAG
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| Protein sequence | MTASRAETLT LTQRLLDREA ACDGSVAYRF VTHDDRQRLE WSYATLVTHA KRLAAALQHR
RLQRERVLIL CAVGEEYTSV FFACLLAGAV AVPCTPLRGM RHRTKIVEII RSCAPRLVVC
DEASMQPLAA LLQSAGLHDV ERVAPAGLAA ENHAWQPPDI TSSDIALLQY TSGSTSDPKG
VVVTHASIMA NLAGIEQKFG LGPASRGMVW LPPYHDMGLI GGVLSPVYTG YPITLLSPLL
FIQKPVRWLR LISQYRITTS GGPNFGYQAC VERVDDSECA GLDLSTWELA FNGAERVNAQ
TLERFTRRFA PYGFRGAAHY PTYGMAESTL MISGGARGAG YKVLPEIADS QQGAQFRDAV
SCGSALDGHA LLVVDPASRR PVADGAMGEV WVSGPSVAAG YWGHPSEAFH GRVEGRAGRF
LQTGDLGVLR DGELYLLGRM KEVIIIRGAN FFPSDLENAI RGAHEALNPE GVAVFSHAGE
GDESIVVMAE LRRGTRDTPP EDIKARISAA LASEFDLRPS DVVLLPIGGI LRTSSGKPMR
MKMKQLYLQQ RAPEPEPVA
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