Gene RS01919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS01919 
SymbolRSp0788 
ID1223095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp991601 
End bp993346 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content67% 
IMG OID637240648 
Productputative transferase protein 
Protein accessionNP_522349 
Protein GI17549009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2192] Predicted carbamoyl transferase, NodU family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.421944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0166613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACT ACATAGGACT CGCTTGCACC GGCCATGAAA ACGCGTTGGC CATCGTCAAT 
CCGGACGGTG AAATCGTGTT TGCCGAGGCG ACCGAACGAT TCCTGCAGAA CAAGCGCGCG
GTGAACACGC CGCCGGACGA TCCGCTGCGC ATCCCGCGGC TGCTGAAGCA GTATTGCAGC
GACTGCGATG CCATCGTCGT CGCCAAGACC TGGAGCCGGG AGGCGCCGCA GAAGATGCGC
ACCGATGCCG CGCACATCCT CAAGGCGCTG GCCGGGACCG ACGCCCGGAC CGATCGCGAC
TGGGTCGCCC GCGTTGCCTT CCATGCCGGG CTGGGCGACA AGCTGATCGA GCCCAACTAC
CGGCTGGCCG GCAACGGCAT CGAGCGCTAC TGCAGCCTGC AGGGCCTGGA GCATTCGGTG
CGCAGCTACG AGCACCACCT CACGCACGCG GCCTACGCCT GCCATACCTC GCCCTTCGAC
GACGCGGTCT GCGCGGTCTT CGACGGCTAC GGCGAGGGCG TGCACAGCAG CTACTTCCAT
TACCGCAACG GCAAGGTCGA GCCGATCCGG CGCGCCCGGT CCGCCAAGGG GCAGTACGGG
TCGCTGGCCA GCCTGGGCCT GTACTACGGC TACACGATCT GCGCGCTGCT GGGCCTCGAC
ATCGTCAATG GCGAAGAATG GAAGGTCATG GGCCTGGCGC CGTATGGCCA GCTGAATCCG
GCGTTCCTGG ACGTGCTGCG CCGCCACATC TACGTCGACG GCCTCGATCT GGTGATGGAC
GGCAACGCGG CCGGCACCTA TCGCGAACTG CAGGCCTTTG CGCGCCGCCC CGGCCAGAGC
TACGAGTCGG TGGCCGACAT CGCCTACACC GCGCAGCATT ACTTCAGTGA ACTGATGCTG
GAGATGCTGG CCGGGCTGCG GCAGTTGGGC CTCTCCGACC GGCTGGTGCT CACCGGCGGC
TGCGCCCTGA ATTCGACCTT CAACGGCGAG GTGATCCCCC GCAGCGGCTT CGCGCAGCTC
TACGTGCCGC CGGCGCCGTC GGACGACGGC AATGCCGTCG GCGCCGCGCT GCTGGCCTAT
GCCGAAGATG GCGGCGCCAT GTCGCGCCCG GCCTTCCATT CGCCCTACCT CGGCTCGGCG
ATCGACGACC GGGAGCTGGC GCCCTTCCTG AAGAACGGCG CGATGCTCGG ACAGGTGCCG
GTGACGCCGG GCGAGCTGTG CGACTACGTG GCCCAGGAAC TGGCCGACGG CAAGGTGATC
GGCTGGATCC AGGGGAGCGC CGAGTTCGGC CCCCGATCGC TCGGCAACCG TTCGATCCTG
GCCGATCCGC GGCGCGCCTC GATGAAGGAG CGGATCAACG CCATCGTGAA GTTCCGCGAA
GGCTTCCGGC CGTTCGCGCC CTCCATCCTG GACGAGTTTG GCGACCGCTA CTTCGAAGAC
TATTCGGCCA CGCCCTACAT GGAGAAGACC CTGAAGATCC GGGAGGCCTA CCGCGAGGCC
ATCCCCGCGG TGTGCCACGT CGACCATACC GGCCGCCTGC AGACCGTGCG CCGGGACTGG
AACCCGCGCT TTCACGCGCT GCTGAGCGCC TTCCATGCGC GCACCGGCAC CCCGGTCCTG
CTCAACACCA GCCTGAACGT CATGGGCAAG CCCATCGTCC ACAGCGCGGC GGATGCCTTC
ACCGTGTTCC TGTCGACCGG GCTCGACCTG CTGGTGATCA ATGACCACGT CTTCTCCAAG
CGCTAG
 
Protein sequence
MKYYIGLACT GHENALAIVN PDGEIVFAEA TERFLQNKRA VNTPPDDPLR IPRLLKQYCS 
DCDAIVVAKT WSREAPQKMR TDAAHILKAL AGTDARTDRD WVARVAFHAG LGDKLIEPNY
RLAGNGIERY CSLQGLEHSV RSYEHHLTHA AYACHTSPFD DAVCAVFDGY GEGVHSSYFH
YRNGKVEPIR RARSAKGQYG SLASLGLYYG YTICALLGLD IVNGEEWKVM GLAPYGQLNP
AFLDVLRRHI YVDGLDLVMD GNAAGTYREL QAFARRPGQS YESVADIAYT AQHYFSELML
EMLAGLRQLG LSDRLVLTGG CALNSTFNGE VIPRSGFAQL YVPPAPSDDG NAVGAALLAY
AEDGGAMSRP AFHSPYLGSA IDDRELAPFL KNGAMLGQVP VTPGELCDYV AQELADGKVI
GWIQGSAEFG PRSLGNRSIL ADPRRASMKE RINAIVKFRE GFRPFAPSIL DEFGDRYFED
YSATPYMEKT LKIREAYREA IPAVCHVDHT GRLQTVRRDW NPRFHALLSA FHARTGTPVL
LNTSLNVMGK PIVHSAADAF TVFLSTGLDL LVINDHVFSK R