Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01919 |
Symbol | RSp0788 |
ID | 1223095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 991601 |
End bp | 993346 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240648 |
Product | putative transferase protein |
Protein accession | NP_522349 |
Protein GI | 17549009 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2192] Predicted carbamoyl transferase, NodU family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.421944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0166613 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACT ACATAGGACT CGCTTGCACC GGCCATGAAA ACGCGTTGGC CATCGTCAAT CCGGACGGTG AAATCGTGTT TGCCGAGGCG ACCGAACGAT TCCTGCAGAA CAAGCGCGCG GTGAACACGC CGCCGGACGA TCCGCTGCGC ATCCCGCGGC TGCTGAAGCA GTATTGCAGC GACTGCGATG CCATCGTCGT CGCCAAGACC TGGAGCCGGG AGGCGCCGCA GAAGATGCGC ACCGATGCCG CGCACATCCT CAAGGCGCTG GCCGGGACCG ACGCCCGGAC CGATCGCGAC TGGGTCGCCC GCGTTGCCTT CCATGCCGGG CTGGGCGACA AGCTGATCGA GCCCAACTAC CGGCTGGCCG GCAACGGCAT CGAGCGCTAC TGCAGCCTGC AGGGCCTGGA GCATTCGGTG CGCAGCTACG AGCACCACCT CACGCACGCG GCCTACGCCT GCCATACCTC GCCCTTCGAC GACGCGGTCT GCGCGGTCTT CGACGGCTAC GGCGAGGGCG TGCACAGCAG CTACTTCCAT TACCGCAACG GCAAGGTCGA GCCGATCCGG CGCGCCCGGT CCGCCAAGGG GCAGTACGGG TCGCTGGCCA GCCTGGGCCT GTACTACGGC TACACGATCT GCGCGCTGCT GGGCCTCGAC ATCGTCAATG GCGAAGAATG GAAGGTCATG GGCCTGGCGC CGTATGGCCA GCTGAATCCG GCGTTCCTGG ACGTGCTGCG CCGCCACATC TACGTCGACG GCCTCGATCT GGTGATGGAC GGCAACGCGG CCGGCACCTA TCGCGAACTG CAGGCCTTTG CGCGCCGCCC CGGCCAGAGC TACGAGTCGG TGGCCGACAT CGCCTACACC GCGCAGCATT ACTTCAGTGA ACTGATGCTG GAGATGCTGG CCGGGCTGCG GCAGTTGGGC CTCTCCGACC GGCTGGTGCT CACCGGCGGC TGCGCCCTGA ATTCGACCTT CAACGGCGAG GTGATCCCCC GCAGCGGCTT CGCGCAGCTC TACGTGCCGC CGGCGCCGTC GGACGACGGC AATGCCGTCG GCGCCGCGCT GCTGGCCTAT GCCGAAGATG GCGGCGCCAT GTCGCGCCCG GCCTTCCATT CGCCCTACCT CGGCTCGGCG ATCGACGACC GGGAGCTGGC GCCCTTCCTG AAGAACGGCG CGATGCTCGG ACAGGTGCCG GTGACGCCGG GCGAGCTGTG CGACTACGTG GCCCAGGAAC TGGCCGACGG CAAGGTGATC GGCTGGATCC AGGGGAGCGC CGAGTTCGGC CCCCGATCGC TCGGCAACCG TTCGATCCTG GCCGATCCGC GGCGCGCCTC GATGAAGGAG CGGATCAACG CCATCGTGAA GTTCCGCGAA GGCTTCCGGC CGTTCGCGCC CTCCATCCTG GACGAGTTTG GCGACCGCTA CTTCGAAGAC TATTCGGCCA CGCCCTACAT GGAGAAGACC CTGAAGATCC GGGAGGCCTA CCGCGAGGCC ATCCCCGCGG TGTGCCACGT CGACCATACC GGCCGCCTGC AGACCGTGCG CCGGGACTGG AACCCGCGCT TTCACGCGCT GCTGAGCGCC TTCCATGCGC GCACCGGCAC CCCGGTCCTG CTCAACACCA GCCTGAACGT CATGGGCAAG CCCATCGTCC ACAGCGCGGC GGATGCCTTC ACCGTGTTCC TGTCGACCGG GCTCGACCTG CTGGTGATCA ATGACCACGT CTTCTCCAAG CGCTAG
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Protein sequence | MKYYIGLACT GHENALAIVN PDGEIVFAEA TERFLQNKRA VNTPPDDPLR IPRLLKQYCS DCDAIVVAKT WSREAPQKMR TDAAHILKAL AGTDARTDRD WVARVAFHAG LGDKLIEPNY RLAGNGIERY CSLQGLEHSV RSYEHHLTHA AYACHTSPFD DAVCAVFDGY GEGVHSSYFH YRNGKVEPIR RARSAKGQYG SLASLGLYYG YTICALLGLD IVNGEEWKVM GLAPYGQLNP AFLDVLRRHI YVDGLDLVMD GNAAGTYREL QAFARRPGQS YESVADIAYT AQHYFSELML EMLAGLRQLG LSDRLVLTGG CALNSTFNGE VIPRSGFAQL YVPPAPSDDG NAVGAALLAY AEDGGAMSRP AFHSPYLGSA IDDRELAPFL KNGAMLGQVP VTPGELCDYV AQELADGKVI GWIQGSAEFG PRSLGNRSIL ADPRRASMKE RINAIVKFRE GFRPFAPSIL DEFGDRYFED YSATPYMEKT LKIREAYREA IPAVCHVDHT GRLQTVRRDW NPRFHALLSA FHARTGTPVL LNTSLNVMGK PIVHSAADAF TVFLSTGLDL LVINDHVFSK R
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