Gene RS01918 details

Gene Information

• Locus tag: RS01918
• Symbol: RSp0789
• ID: 1223096
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003296
• Strand: +
• Start bp: 993368
• End bp: 995464
• Gene Length: 2097 bp
• Protein Length: 698 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637240649
• Product: hypothetical protein
• Protein accession: NP_522350
• Protein GI: 17549010

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.343555
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0205724
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCAATC CGATCCTTCA TGCCGCTGTC GGCGGCGAGC GCGAGGCCTA CTCGGTCCGG 
GGGCACGCAT GCATCGCGCA GGCAGCACTG CCGTCGCCGC GCGAGCTGTG CCGGCTGCTG 
TGCGACGACG CGCCCTCGGA ATACCGGCTG TATCTGGCCA AGGCCAGTAC CCGGTTCTTC 
GATGCCGAGC TGCCGCCGGC CGGAAGCGGT TCGCTGCGGC GCTCGGCCGT GTCTGGCGCG 
CGCACCATCG CCGCGCTGTG CCGGCGCGCC GAGGGGGCCG TGGGCGTGCT GCCGCAGCTG 
CGCTTTCTGG CCTGCGCCAG CGATCGCCTC CTGCTGCAGA TCGCCGACGT CCGCAACTTC 
TCGCGGCCGC TGATGCACGT CCTCTTCAGG CTGCTGGACG ACGGCGATCA GCCGGCGATC 
CTGGCCACGC TCGACGGCCA TGCCCGCCAC ACGGGCGCCT GGCTCGGCCC GCAGCACGAT 
CTGCGCGGCG ATCTCGCCGA GGCGGGTTTC GATGACGAGG CCTTCCTCGC GGCCAGCATT 
CCCGCCGCGC TCGGCACCCT GGCCTGCGAG CGCCTGCCGG AGATCGCCGG TTTCGCCTGT 
GCCTTGTGGC GGGCCATGGC GCTGCTGACC CACGGCACCG CCCAGGGCCG GTTCTACCGG 
ACGCGCAGCC GCGCGCTGTG GCAGGCGCTG GCCGGCCTGG AGCCCGACGG AATCGGATCG 
ACGGCCACCA CCGCCGACGG GGTGCGCCGT GGCGCGATGC TGTTCCGCGC CTGCCTCGGC 
CTGCTCGACG ACGCCACCCG CGACAGCGCG GCCCGCGCCT GCCGGCGGGC CGCCGACATC 
ATGGAGAACA AGGCCCGCTT TGCGCTGATC CATCACCCGA ACGTGTCGCT TGCCGGCCGG 
CGCCTGGTGG AATGGTTCAA CGACAGCGAG CACCCGGGGG CGGCCCTGCT GCAGGCGCTC 
TGGAACTCCC ACTGGATCCG GCGCGCGTGC ATCGATGACA GTCCCTTCTT CCGCAACCTG 
CTCGGCGAGG GCGGCAAGAT GCAGGGCGTG TTCGCCCCGC CCGAGATCGA ATCGCTGAAG 
GCGCACTTCC GGATGCTGGC CGCCGGCGAG CAACCCGCGA CGGAAGCCGG CCTTGCCGCG 
CGCTGGCAGG ATTTCCTGGC GCGTGACCGG CAAGCGGCCC TGGACACCGC GCCGGCATGC 
GCCGATGGCC ACGGCAGCTT CCGCGCGGCC TACAGCGCCA TCCTGAATGC CGAGTCGCGC 
CCGGCGTCGA TCGAGGTGGC GCGGCAGGTG GTGGAGCGCA TCGCCTCGGA GTTCGCGAAG 
CTGCGGCCGA GCATGGAGGC GCAGCCGCTG GCGCGGCCCT TCGCGTACTC GCGCGCCGAG 
TTCGAGCGCC GCATCGAGAG CCTCTACTAC TTCCAGGCCG AGCAGACGCA GAAACTCCAG 
CTCGACCTCT GCGACCCGGG CCTGCGGCAG TTGCACATCG CATTCGCGCC CTTCGCGCTG 
GTCGATGGCT GCTGGCTCCG GTACGCCGGC GCCGCCGAGC TGTCCCGCGG CGTCAAGGCC 
CGGCTGTTCA GCATCTTCGC GGACGAGGTG GGCAACGGGC GCTACGAGGC CAACCACGCC 
AACATCTACC GCCGCCTGCT CGCCGACATG GGCTTCGAGT TCGCCGAGGC GTGGCACGAC 
GCCTTCGCCC AGGACCCGCG CATTCCGGAG CAGGCCTACA AGGTGCCGTC GTTCCTGCTG 
GCCGTGGGCG TTTGCGCGCA GCAGTACTAC CCCGAGACCC TGGGCATCAA CCTGGCGATC 
GAGATGTCGG GCCTCGACGG CTTCTACGAG GCGATGATCC GCAACCTGGA GCCGCGCGGC 
TTGCGGGCGG ATTTCTGGCG CGTGCACGTG TCCATCGACA ACTTCTCTTC AGGCCATGCC 
CGGCAGAGCG TCAACGCCAT CGCCGAGCAC ATGGCATCGG TGCTGGACCG GTACGGCACC 
GACGTGGCCG ACCTGGTGTG GAGCCGCATC TGGACCGGCT TCCTGACCAT GATCTACCTG 
TTCCGCGTCG AGCTGGCCGT ATTGATGTCC AGCGCGACAT CGGCCACCCG GCATTGA 

 

Protein sequence

MTNPILHAAV GGEREAYSVR GHACIAQAAL PSPRELCRLL CDDAPSEYRL YLAKASTRFF 
DAELPPAGSG SLRRSAVSGA RTIAALCRRA EGAVGVLPQL RFLACASDRL LLQIADVRNF 
SRPLMHVLFR LLDDGDQPAI LATLDGHARH TGAWLGPQHD LRGDLAEAGF DDEAFLAASI 
PAALGTLACE RLPEIAGFAC ALWRAMALLT HGTAQGRFYR TRSRALWQAL AGLEPDGIGS 
TATTADGVRR GAMLFRACLG LLDDATRDSA ARACRRAADI MENKARFALI HHPNVSLAGR 
RLVEWFNDSE HPGAALLQAL WNSHWIRRAC IDDSPFFRNL LGEGGKMQGV FAPPEIESLK 
AHFRMLAAGE QPATEAGLAA RWQDFLARDR QAALDTAPAC ADGHGSFRAA YSAILNAESR 
PASIEVARQV VERIASEFAK LRPSMEAQPL ARPFAYSRAE FERRIESLYY FQAEQTQKLQ 
LDLCDPGLRQ LHIAFAPFAL VDGCWLRYAG AAELSRGVKA RLFSIFADEV GNGRYEANHA 
NIYRRLLADM GFEFAEAWHD AFAQDPRIPE QAYKVPSFLL AVGVCAQQYY PETLGINLAI 
EMSGLDGFYE AMIRNLEPRG LRADFWRVHV SIDNFSSGHA RQSVNAIAEH MASVLDRYGT 
DVADLVWSRI WTGFLTMIYL FRVELAVLMS SATSATRH