| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01905 |
|---|
| Symbol | RSp0802 |
|---|
| ID | 1223109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | + |
|---|
| Start bp | 1009657 |
|---|
| End bp | 1010883 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637240662 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_522363 |
|---|
| Protein GI | 17549023 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.224952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCG ATACCCTGTT TCCCCATCCT TGCTGCATGC CCGACGACTC TTCCCGCGCG
CGTGCCGATG CCGCCCCGGC GCCGGCCGCT GTCTTCTCCA CCGCACACGG TTCCCATCCA
CCGTTCTGGC AAAGCCTCAA GCAGGACACC TTCTTCTGGC TGCTGCTGAT CGTCTGCGCG
GGACTGACCA CCCTGGCGCC CCAACGCATC GTCCAATATC CGCAGTTGGT GGATTGGCAC
ACGATTGCCG CCCTGGCGGG GCTGCTGATC CTGACCAAGG CGGTGGAGTC CAGCGGGATG
CTGCAGCTGC TCGGCCAGCG CCTGGTGGAT GCGGTGCAGA GCGAACGCGT GCTCGCGCTG
AGCCTCGTGG GTGCCTCGGC GGCGCTGTCG ACGCTGCTGA CCAATGACGT CGCGCTATTC
GTGATCGTGC CGCTGACAGT CGGGCTGCGG CACGTCGCCA GGCTGCCGGT GACGCGGCTG
ATCGTGTTCG AGGCGCTGGC CGTCAATGCG GGCTCCGCGC TCACGCCGAT CGGCAATCCG
CAGAACCTCT TCCTGTGGCA TCAGTCCGGT CTGTCGTTCG GCGGGTTTGT CTGGCAGATG
GCGCCGATGG TGGCGCTGCT GATGCTGTTG CTGCTGGTGG GGACGTGGTT CGCGTTTCCC
GCGCAGACCA TCCACGTGCA TTCGGACGTC GACGCACCCG AGCTGCACAA GCGCCTGCTG
CTGCCCGCGC TGGCGCTCTA TGTGCCGTTC CTGCTGCTGA CCGACCGGGG GTATCCGCTG
GCGGCGCTGG CGGGCATGGT GGTGCTGTAC CTGATCGGCG CGCGCTACGT GCTGGCCCGC
GTCGATTGGG GCCTGCTGCT GGTGTTCGTG CTGATGTTCA TCGATCTGCG GCTGATGGCC
CAGCTGGAGC CGGTCCGGCA TGGGCTTGCC ATGCTGGCGC TGAGCGAGCC GACGCATCTG
TACTGGGCGG GCATCGGCCT GTCGCAGGTC ATCAGCAACG TGCCGGCGGC GATTCTGCTG
GCCGAGTCTT CCCATGACTG GCCGGTGATG GCCTTTGCCG TGAGCGTCGG CGGCTTCGGC
TTCATGGTCG GCTCGCTGGC CAACCTGATC GCCCTGCGGA TGGCGCGGGA CAAGCGGGCA
TGGCTGGTGT TCCATGTCTA TTCGATGCCG TTCCTGGTGG CAGCCGCGGG CATCGTGTTT
CTGTGGATGG CGCTTTCCCC CCGTTGA
|
|---|
| Protein sequence | MRVDTLFPHP CCMPDDSSRA RADAAPAPAA VFSTAHGSHP PFWQSLKQDT FFWLLLIVCA
GLTTLAPQRI VQYPQLVDWH TIAALAGLLI LTKAVESSGM LQLLGQRLVD AVQSERVLAL
SLVGASAALS TLLTNDVALF VIVPLTVGLR HVARLPVTRL IVFEALAVNA GSALTPIGNP
QNLFLWHQSG LSFGGFVWQM APMVALLMLL LLVGTWFAFP AQTIHVHSDV DAPELHKRLL
LPALALYVPF LLLTDRGYPL AALAGMVVLY LIGARYVLAR VDWGLLLVFV LMFIDLRLMA
QLEPVRHGLA MLALSEPTHL YWAGIGLSQV ISNVPAAILL AESSHDWPVM AFAVSVGGFG
FMVGSLANLI ALRMARDKRA WLVFHVYSMP FLVAAAGIVF LWMALSPR
|
|---|
| |