| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01890 |
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| Symbol | RSp0817 |
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| ID | 1223124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 1029831 |
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| End bp | 1031306 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637240677 |
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| Product | outer membrane drug efflux lipoprotein |
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| Protein accession | NP_522378 |
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| Protein GI | 17549038 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0642226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.753424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTT TTTCTCCTAC CGCGCTTGCG CTGGCCGCCA CGCTCGCCGG CTGCACGCTG
ATGCCAACCT ACCAGCAGCC GGCCGCGCCG GTGCCGGCCG CCTTCGCCGG CGCATCGGAC
GATCGAGGCG ACACCGACGG CACCCGGGCA GCCACCCCCG TGGCCGAGAT CGGCTGGCGC
GACGTGTTCA CCGACCCGTC GCTGCAGCGC GTGATCGACC TGGCGCTGGC CAACAACCGC
GATCTGCGCG TGGCCGTCCT CAACCTTGAG AAGGCACGCG CGCAGTACCG CGTGCAGGAC
GCGGCGCTGT TCCCCACGGT CAAGGCCAGC GGCAGCGAGA GCGCCAGCCG CACGCCGGCC
GCCCTGTCGG CCACCGGGCA ACCGGTGGTG TCGCACACCT ACAGCGCCAC GCTCGGCTTC
AGCGCCTACG AGCTGGACCT GTTCGGCCGC GTGCGCAGCC TCAGCGCGCA GGCGCTGGAG
CAGTACCTCG CCACCGTCGA AGCGCGCCGC AGCAGCCAGA TCAGCCTGGT CGCCGAGGTC
GCCACCGCCT ACCTGACCCT GGCCGCGGAC CAGGATCTGC TCAAGCTGGC GCAGGACACC
CTGTCCAGCC AGAGCGATAC CTACCGCCTC AATCAGCGCA GCTACGAGCT GGGCACGGCC
TCCAGGCTGA CGCTGCGCCA GTCGCAGACC AGCGTCGACG CCGCGCGCGT CGACGTGGAG
CGCTACACCG CCCAGGTGGC GCAAGACCGC AACGCGCTGG TGCTGCTGGT GGGCGCCGAC
GTGCCGGCCG AGTTGCTGCC CAGGTCGCTG CCCGATCCGT CGGCCGCGAG CGGCAGCGTG
CTGGCGACCA TCCCGCCGGG GCTCGCGTCC GACCTGCTCC AGCGCCGGCC GGACATCCTC
CAGGCCGAGC ACGACCTGAA GGCCGCCAAC GCCAACATCG GCGCCGCGCG CGCGGCCTTC
TTCCCGAGCA TCAGCCTGAC CGCCTCGGCC GGCACGTCCA GCGCCAGCCT GGCCGGCCTG
TTCAAGGGCG GCTCGGGGGT GTGGAGCTTC GGGCCCCAGA TCTCGCTGCC GATCTTCGAC
GGCGGCGCCA ACCGCGCGAA TCTCGACATC GCCAACGCCA GCCGCGACAT CGCCCTGGCG
CAGTACGAGA AAGCCATCCA GACCGCGTTC CGCGAGGTCT CCGATGCGCT GGCCCAGCGC
GGCACGCTGG GCCGCCAGCT CGACGCGCAG CAGTCGCTGG TCGATGCCAC CTCGGACAGC
TATCAGCTCG CCACCGCGCG CTTCAAGCGC GGCGTGGACA GCTACCTGAA CGTGCTCGAC
TCGCAGCGCT CGCTGTACAC GGCGCAGCAG AACCTGATCA ACACGCGCCT GTCGCGCTTG
ACCAACCTGG CGACCTTCTA CAAGACGCTG GGCGGCGGCT GGGTCGAGAC GAGCGGTGCG
CCGGTGGCGG CCGCCCGGAG CGCCCCGGGC GCCTGA
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| Protein sequence | MIRFSPTALA LAATLAGCTL MPTYQQPAAP VPAAFAGASD DRGDTDGTRA ATPVAEIGWR
DVFTDPSLQR VIDLALANNR DLRVAVLNLE KARAQYRVQD AALFPTVKAS GSESASRTPA
ALSATGQPVV SHTYSATLGF SAYELDLFGR VRSLSAQALE QYLATVEARR SSQISLVAEV
ATAYLTLAAD QDLLKLAQDT LSSQSDTYRL NQRSYELGTA SRLTLRQSQT SVDAARVDVE
RYTAQVAQDR NALVLLVGAD VPAELLPRSL PDPSAASGSV LATIPPGLAS DLLQRRPDIL
QAEHDLKAAN ANIGAARAAF FPSISLTASA GTSSASLAGL FKGGSGVWSF GPQISLPIFD
GGANRANLDI ANASRDIALA QYEKAIQTAF REVSDALAQR GTLGRQLDAQ QSLVDATSDS
YQLATARFKR GVDSYLNVLD SQRSLYTAQQ NLINTRLSRL TNLATFYKTL GGGWVETSGA
PVAAARSAPG A
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