| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01887 |
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| Symbol | RSp0820 |
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| ID | 1223127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 1036232 |
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| End bp | 1037572 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637240680 |
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| Product | putative hemagglutinin-related protein |
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| Protein accession | NP_522381 |
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| Protein GI | 17549041 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCATTGG CGCTGACGCT CGCGGCATCC GCCTGTGGCG GTGGCGGCGA TGCTTCTACC
GCGGCACCGG CCGGCATGTC CGCCGGTGCG GCCACTTACA GCGTTGGCGG CAGCGTGTCG
GGCCTGGGGC CGGGGTTGTC GCTCCAGTTG CTCAACAACG GCGGCGATGC TGTCACGGTT
GGCGGCAATG GCGGCTTTCG CTTCCCGGGC AAGCTGTCGG CTGGAGCTAC CTACGCGGCG
ACCGTCGGCA CCCGGCCGTC GGGCCAGCAG TGCACGATCG ACAAAGGCAG TGGCACGGTC
GCCAACGCGG ATGTTGCCGA TATTGCAGTG ACGTGCTCGG CACGCCCGCT CTTTGCCTAC
GTGGCGAATG CGGATGACAA CACCGTGCAG GCGTTTGCGC TGGACCCCGC CACGGGGGCC
GCCACCGGTG TGGGCCGTCC TGCGGCCGTG GGGCACGGTC CGGTCTCGCT GGTTGCTGAC
CCTGCGGGCA CAACCCTCTA TGTGGTCAAC GCCTCCGACA ATACGGTGAC CACGCTGGCG
ATCCATCCGG ATACCGGTGC CGTGTCGGTC AGCGCGCCAG CCGTCCGCAC GGGAGCGTCT
CCGCTGAGCA TCGCGCGCAC GCCCGCCGGA CCGTTCGCCT ATACCGCCAA CGCCGGGGAC
AATACGCTGT CGATCTTCAA GATGAGCGCC AAGGCAGAGG CTCCGGCCCC GCGCGGTGTC
GTGCAGGCGG GCTCCAACCC GTACACCGTT GCTGTCAACG GCACGGGCAC GTTCGCCTAT
GTGGTGAACG CGGCCATGGT TTCCGGCGCG CCGTCGGTCA TGGCCTTTGC CATCAACGGT
GCAACCGGCG CGCTGGTGCC GGCAGGCAGC CCGGCGGCAA CGGGCCATGC ACCGTTTTTC
ATTGCACTCC ATCCGGCGGG GAGGTTTGCC TATGTCGCCA ATTTCGCCGA CGACACGCTG
AGCGTCTACG CCATCAACGG GGCCACCGGC GCGCTCGCCC CGGCGGGCAG CCCGGTTGCC
ACCGGCGGCA ATCCGTTCGC GATCGCGATC CATCCGTCAG GCCGCTTCGC TTATGTCGCC
AACGTGTTCT CAGGCACGAT CAGCCTGTTC GCCATCGACG CACGCACCGG TGCGCTGACC
CCCATCGGCA CTGTGCAGGC AGGCGCCAGC CCGGTTGCCA TGACGCTCAA TCCGGCCGGC
ACTGTTGCCT ACGTGTTGAA TGCCGGCGAC GACACCATGG CCATCTACCG GGTGGACGGC
GGCACGGGCG TTCTGAGCGC GGTAGCCACG GTACAGACAG GCCTCACGCC GAGCGCGATG
GCGATCGTGG CCGTGCCTTA G
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| Protein sequence | MALALTLAAS ACGGGGDAST AAPAGMSAGA ATYSVGGSVS GLGPGLSLQL LNNGGDAVTV
GGNGGFRFPG KLSAGATYAA TVGTRPSGQQ CTIDKGSGTV ANADVADIAV TCSARPLFAY
VANADDNTVQ AFALDPATGA ATGVGRPAAV GHGPVSLVAD PAGTTLYVVN ASDNTVTTLA
IHPDTGAVSV SAPAVRTGAS PLSIARTPAG PFAYTANAGD NTLSIFKMSA KAEAPAPRGV
VQAGSNPYTV AVNGTGTFAY VVNAAMVSGA PSVMAFAING ATGALVPAGS PAATGHAPFF
IALHPAGRFA YVANFADDTL SVYAINGATG ALAPAGSPVA TGGNPFAIAI HPSGRFAYVA
NVFSGTISLF AIDARTGALT PIGTVQAGAS PVAMTLNPAG TVAYVLNAGD DTMAIYRVDG
GTGVLSAVAT VQTGLTPSAM AIVAVP
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