| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS01789 |
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| Symbol | RSp0660 |
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| ID | 1222967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 838791 |
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| End bp | 839612 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637240520 |
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| Product | porin protein |
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| Protein accession | NP_522221 |
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| Protein GI | 17548881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGAGA GCGGCTTCGA TATCGACACC GGCAGGTCCG CCCAAGGCAA TCGCCTGTTT
GGTCGCCAGG CCTACGTCGG CCTGCAGGGC GATTTCGGCG CCATCACGAT GGGACGCCAG
CAAAATGCAT TGTTTGACCT GTTTGGTGCC TACGACCCGA TGTCCGTTGC GGGCGTCTAC
TCGCTCAACG CGGTCGACAA CCAGTTCAAC GGGCGGGCAG ACAACGCACT GAAGTACACG
GGCAAGTTTG GCGGCCTGAC CGCGACCGGC TTCTATAGCT TCGGCCGCGA TGCCAATGTG
GGGCTGGGCG GCGAGGTGCC GGGCAGCTTC AAGGTCGGCA CCAACTTCGG CGGGGGCTTG
GCTTACGCGA ATGGCGCGCT TTCGGTGGGC GCCGCCTACG ACCAGTACCA GGGAAGCACC
CTTGCAGCTT CGGGCCTTTC CGCCAAGCGT GCCGCGATTG GTGCGTCGTA TACGCTGGGT
GAGGCGAAGG TCTTCGCCGG CTATCGCTGG CTACGCGATG AAGTCTCGAC CAGCACCGCA
CGTCATGACA ATCTGTACTG GCTTGGCGCA CAGTACAAGC TCACGCCGGC CTTCACGCTG
AACGGCGCAG CGTATTACAC GAATGCGCGT ACGGACAGCA ACAGTTCGTG GATGTTTGTG
CTGAACGGCA ACTATGCTTT GTCCAAGCGG ACCGACGCCT ATGTCCTTGT CGGCTACGTG
ACCAACAAGG GCAACGCGAC GTTCGGTGTC ACCGGCACGG CCAACACACT GCCGGGCCAG
AACCAGACCG GCGCCATGAT TGGCATGCGT CATCGCTTCT GA
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| Protein sequence | MLESGFDIDT GRSAQGNRLF GRQAYVGLQG DFGAITMGRQ QNALFDLFGA YDPMSVAGVY
SLNAVDNQFN GRADNALKYT GKFGGLTATG FYSFGRDANV GLGGEVPGSF KVGTNFGGGL
AYANGALSVG AAYDQYQGST LAASGLSAKR AAIGASYTLG EAKVFAGYRW LRDEVSTSTA
RHDNLYWLGA QYKLTPAFTL NGAAYYTNAR TDSNSSWMFV LNGNYALSKR TDAYVLVGYV
TNKGNATFGV TGTANTLPGQ NQTGAMIGMR HRF
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