Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01765 |
Symbol | RSp0684 |
ID | 1222991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 871257 |
End bp | 871973 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637240544 |
Product | hypothetical protein |
Protein accession | NP_522245 |
Protein GI | 17548905 |
COG category | [S] Function unknown |
COG ID | [COG3382] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.73481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.164289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA ACATGTACTT CTACCATTCC GACGCCGTGT GGGACCGATT TCCGACGCTC TCGGCCCTGA CGATGGTTCT GCGCGGCGTT CGCGCCACCA GTGACGCGGC AGTGGATATC GATGCAACGC TGGATCAGGT TGCCGCCCAA CTGGACCGGA CTGCCGAAGG CGAGCTGCCG TCCATCCAGG CCTGGCGCCA GGCGTACTCG ACGATGGGGT TGAAGCCGAC CCAGTACCGC TGCGCGGCGG AAGCGCTGCT GCGTCGGTTC CGCAAGGATC GCGAGCTGCC GCGCTTTCAT CCGCTGATCG ACACGCTCAA CGCGGAGTCG ATGCACGCCG CGATACCGAT CGCCGCGTTC GACTGCGCCC ACATCGTCGA CGGCATCACG GTCCGCCCCG CGACCGGCAC CGAACGCTAC CGCACCTTCC AGGGCGAGAC CGAACATCCG GCGGAGGACG AAATCGTCTT CGCGGACGCA GCCGACGAAG CGCACTCGCG CAGGTGGGTG TTTCGACAGG GTGCCACCTC GATCGTATCG AAGGCGTCCG ACACCGTGCT GATCGTTGCC GAAGCGCTGC ACGACCGGGC CGCGGAAGAC CTGTCGGCGC TGCGCGAATC GATTCGCCAG CGCATGAACG CCTTGGGCAT TGCCATCACC GACGACGCAA TGCTGACGCG TTCGCACAGA CGCTTCACGT TCGCCCATGG CATCTGA
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Protein sequence | MNPNMYFYHS DAVWDRFPTL SALTMVLRGV RATSDAAVDI DATLDQVAAQ LDRTAEGELP SIQAWRQAYS TMGLKPTQYR CAAEALLRRF RKDRELPRFH PLIDTLNAES MHAAIPIAAF DCAHIVDGIT VRPATGTERY RTFQGETEHP AEDEIVFADA ADEAHSRRWV FRQGATSIVS KASDTVLIVA EALHDRAAED LSALRESIRQ RMNALGIAIT DDAMLTRSHR RFTFAHGI
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