Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS01662 |
Symbol | RSp0891 |
ID | 1223198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 1128574 |
End bp | 1129371 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637240751 |
Product | putative hydratase protein |
Protein accession | NP_522452 |
Protein GI | 17549112 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.103932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC AAGCCCATCA GGCCGCGGCC GACGCGCTGC TGCAAGCCGC GCGCAGCGGG CAGCCGATTC CGCCGCTGCG CGAGACCTAC CCGCACTTCA ATGGCGAAGA CGCCTACGCG GTGCAAGAGA TCAACACACG CCGGCAGCTC GACAACGGCG GGCGGCTGGT CGGCCGGAAG GTCGGGCTGA CCGCCCGCAG CGTGCAGCAG CAGCTTGGCG TCGACCAGCC CGACTTCGGC ATGCTCTTCG CGCACATGGC GTTCCAGGAC GGCGAGCCGA TCGGCTGGTC TCGCCTGATG CAGCCGAAAG TCGAGGCCGA GGTCGCCCTG GTGCTGGAGC GCGATCTGCC CGAACCCGGC GTGACGGCCG CGGCGATGCT GCGGGCCACC GCGTTTGCGC TGCCGGCCAT CGAAATTGTC GGCAGCCGCA TTGCCGATTG GAACATCCGC TTCGTCGACA CGGTCGCCGA CAACGCGTCC AGCTCCGCCT TCGTGCTCGG CAGCACACCG GTGTCGTTGT CCGGCCTGGA TCTGCGGCTG GCCGGCATGG TCATGGAGCG CGGCGCGGAC CAGGTGTCGC TGGGCGCCGG CGCGGCTTGC CTCGGGCATC CGCTGAACGC GGCCGTGTGG CTCGCCAACA CCATGGCGGC GCGCGGTCGC GGGCTGGTCG CCGGGGACAT CGTGCTGACC GGGGCCCTCG GCCCCATGGT CGCGGCGCGT CCGGGCGATG TGTTTGAGGC GCGCATCGAG GGCCTGGGCT CCGTGCGCGC GGTGTTCGCA GACAAGGACA AAACATGA
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Protein sequence | MNTQAHQAAA DALLQAARSG QPIPPLRETY PHFNGEDAYA VQEINTRRQL DNGGRLVGRK VGLTARSVQQ QLGVDQPDFG MLFAHMAFQD GEPIGWSRLM QPKVEAEVAL VLERDLPEPG VTAAAMLRAT AFALPAIEIV GSRIADWNIR FVDTVADNAS SSAFVLGSTP VSLSGLDLRL AGMVMERGAD QVSLGAGAAC LGHPLNAAVW LANTMAARGR GLVAGDIVLT GALGPMVAAR PGDVFEARIE GLGSVRAVFA DKDKT
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