| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00954 |
|---|
| Symbol | RSp0466 |
|---|
| ID | 1222773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003296 |
|---|
| Strand | - |
|---|
| Start bp | 583154 |
|---|
| End bp | 583669 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637240326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_522027 |
|---|
| Protein GI | 17548687 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.32884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.497692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC TGGCGCCCGA TTGGACCACC TTCGGCAGCT GGCTGCGTGC CGCCCGCATC
GCGCGGGGCA GCGGCAGCCT GGCCACGGCC CTCGCCGAGC AGGCCGGCAT GCCGGCGCAG
GCGCAGGCGC AGGCGCAGGC GCAGGCGCAG GCGCTGGTCG CGGCGGCGGC CGGCCGGTTC
GGTTTCCATC TGCTGGATGC GGAAGGCGAC CTCGCCCCGC TGGTCACGCT CGACCCGATC
TCGCTCAAGG ACTGCCGCCA GCACAAGATC CTGCCGCTGC GCATCGCCGG CGATTGGGTC
ATCGCGATGG ACGACCCGTG GGACGAGGCG CTGGTGCGCT GGGTCAATGA GAAGCTCGGC
CATGCCAGGC TGGCCTGGAT GGATGGATGG TCTCCACAGT CTTGCCATCC TCGAACGCGC
TCTGAGCACC ACCCCTTTCA AGGTCTTTCC GCCCGGGCCT TTTTGAGTAC GCGGGCAGTG
CAGACATGGG CTCGGGCGAT GCTGCCGTCC ACATAG
|
|---|
| Protein sequence | MSELAPDWTT FGSWLRAARI ARGSGSLATA LAEQAGMPAQ AQAQAQAQAQ ALVAAAAGRF
GFHLLDAEGD LAPLVTLDPI SLKDCRQHKI LPLRIAGDWV IAMDDPWDEA LVRWVNEKLG
HARLAWMDGW SPQSCHPRTR SEHHPFQGLS ARAFLSTRAV QTWARAMLPS T
|
|---|
| |