Gene RS00952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRS00952 
SymbolRSp0464 
ID1222771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003296 
Strand
Start bp580532 
End bp581776 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID637240324 
ProductGSPE-like protein 
Protein accessionNP_522025 
Protein GI17548685 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.543413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.759947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCTGA GCACGGCTTC GGCGTCCGCC CTGCTAGCCC AGCGAGGCGC GGAAAAGACG 
GTCCAGGACC AGGACGTCGG CCGTGTCGTC TCCCACGACT CCATCGAATC GACGGAAAGC
GCCGTCGTGC GCTTCCTCGA CGCGGTATTG CTCGACGCCT GGCGGGCCGG CGCCAGCGAC
ATCCACGTCG AGACCTCCCG CTCCGGCTTG CACATCAAGC TGCGGCTGGA CGGCGTGCTG
GTGCCCGGCC CCGCGTTCAC CGGTGCGCGC TCGCCCAGCG AAGTGCTGAA CCGGATCAAA
GTGCTGGCCC AGCTGGATAT CGGCGAGACC CGGCTGCCGC AGGACGGCCG CTTCCGCGTG
CGGCTGGAGG GGCGCGATGT CGACATGCGG GTCTCCATCA TGCCCAACGT GTTCGGCGAG
GACGCCGTCA TCCGCTTGCT GGACAAGGCG CAGTTGCGCG GCGCATCGGA AACGCTCACG
CTCGAGGCGC TGGGCTTCGA CACCGCGGCC ACCGCCACCA TCCGCCGGCT GACCAAGGAG
CCGCACGGCA TGCTGCTGGT GACCGGCCCC ACCGGCAGCG GCAAGACCAC CACGCTGTAT
GCCGCGCTCT CCGAAATCAA CACCGGGCGC GACAAGATCA TCACGATCGA AGACCCGGTC
GAATACGAGC TGTCGGGCAT CCTGCAGATT CCCGTCAACG AAAAGAAGGG CCTGACCTTT
GCCCGCGGCC TGCGCTCGAT CCTGCGCCAC GACCCGGACC AGATCCTCGT CGGTGAAATC
CGCGACCCCG AGACGGCGGA GATTGCGGTG CAGGCCGCGC TGACCGGGCA CTTGGTCTTC
ACGTCCGTGC ACGCGAACTC GGCGCTCGAC GTGGTCGGCC GCTTCCTGCA CATGGGGGTC
GACCCCTACA ACTTCATGTC GGCGCTGATC GGCATCGTGT CGCAGCGGTT GCTGCGCCTG
AAATGCCCGG AATGCGCGCC TGCTTCTCCG GATCCGGGCA GCCGGTCCGT CGGGTGCCCA
GCCTGTCGGT ACACCGGGTA CCGAGGTCGT ACCGTTGTCT GGGAAATCGT CCCCGTCAAT
GACACGATCC GTGAGCTCGT GATCCAGCGC GAGCCGCTGC GGCTGATCCG CGAGCAGAGC
CGACAGATGG GCGTGGTGTC GTTGCGCGAC CAGGCGGTGC GCATGGTGGA GCGTGGCCTG
ACGACGTTTG AGGAAATCGA CCGCGTGGTG TCGCCCAATG AATGA
 
Protein sequence
MALSTASASA LLAQRGAEKT VQDQDVGRVV SHDSIESTES AVVRFLDAVL LDAWRAGASD 
IHVETSRSGL HIKLRLDGVL VPGPAFTGAR SPSEVLNRIK VLAQLDIGET RLPQDGRFRV
RLEGRDVDMR VSIMPNVFGE DAVIRLLDKA QLRGASETLT LEALGFDTAA TATIRRLTKE
PHGMLLVTGP TGSGKTTTLY AALSEINTGR DKIITIEDPV EYELSGILQI PVNEKKGLTF
ARGLRSILRH DPDQILVGEI RDPETAEIAV QAALTGHLVF TSVHANSALD VVGRFLHMGV
DPYNFMSALI GIVSQRLLRL KCPECAPASP DPGSRSVGCP ACRYTGYRGR TVVWEIVPVN
DTIRELVIQR EPLRLIREQS RQMGVVSLRD QAVRMVERGL TTFEEIDRVV SPNE