Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00952 |
Symbol | RSp0464 |
ID | 1222771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 580532 |
End bp | 581776 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240324 |
Product | GSPE-like protein |
Protein accession | NP_522025 |
Protein GI | 17548685 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.543413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.759947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCTGA GCACGGCTTC GGCGTCCGCC CTGCTAGCCC AGCGAGGCGC GGAAAAGACG GTCCAGGACC AGGACGTCGG CCGTGTCGTC TCCCACGACT CCATCGAATC GACGGAAAGC GCCGTCGTGC GCTTCCTCGA CGCGGTATTG CTCGACGCCT GGCGGGCCGG CGCCAGCGAC ATCCACGTCG AGACCTCCCG CTCCGGCTTG CACATCAAGC TGCGGCTGGA CGGCGTGCTG GTGCCCGGCC CCGCGTTCAC CGGTGCGCGC TCGCCCAGCG AAGTGCTGAA CCGGATCAAA GTGCTGGCCC AGCTGGATAT CGGCGAGACC CGGCTGCCGC AGGACGGCCG CTTCCGCGTG CGGCTGGAGG GGCGCGATGT CGACATGCGG GTCTCCATCA TGCCCAACGT GTTCGGCGAG GACGCCGTCA TCCGCTTGCT GGACAAGGCG CAGTTGCGCG GCGCATCGGA AACGCTCACG CTCGAGGCGC TGGGCTTCGA CACCGCGGCC ACCGCCACCA TCCGCCGGCT GACCAAGGAG CCGCACGGCA TGCTGCTGGT GACCGGCCCC ACCGGCAGCG GCAAGACCAC CACGCTGTAT GCCGCGCTCT CCGAAATCAA CACCGGGCGC GACAAGATCA TCACGATCGA AGACCCGGTC GAATACGAGC TGTCGGGCAT CCTGCAGATT CCCGTCAACG AAAAGAAGGG CCTGACCTTT GCCCGCGGCC TGCGCTCGAT CCTGCGCCAC GACCCGGACC AGATCCTCGT CGGTGAAATC CGCGACCCCG AGACGGCGGA GATTGCGGTG CAGGCCGCGC TGACCGGGCA CTTGGTCTTC ACGTCCGTGC ACGCGAACTC GGCGCTCGAC GTGGTCGGCC GCTTCCTGCA CATGGGGGTC GACCCCTACA ACTTCATGTC GGCGCTGATC GGCATCGTGT CGCAGCGGTT GCTGCGCCTG AAATGCCCGG AATGCGCGCC TGCTTCTCCG GATCCGGGCA GCCGGTCCGT CGGGTGCCCA GCCTGTCGGT ACACCGGGTA CCGAGGTCGT ACCGTTGTCT GGGAAATCGT CCCCGTCAAT GACACGATCC GTGAGCTCGT GATCCAGCGC GAGCCGCTGC GGCTGATCCG CGAGCAGAGC CGACAGATGG GCGTGGTGTC GTTGCGCGAC CAGGCGGTGC GCATGGTGGA GCGTGGCCTG ACGACGTTTG AGGAAATCGA CCGCGTGGTG TCGCCCAATG AATGA
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Protein sequence | MALSTASASA LLAQRGAEKT VQDQDVGRVV SHDSIESTES AVVRFLDAVL LDAWRAGASD IHVETSRSGL HIKLRLDGVL VPGPAFTGAR SPSEVLNRIK VLAQLDIGET RLPQDGRFRV RLEGRDVDMR VSIMPNVFGE DAVIRLLDKA QLRGASETLT LEALGFDTAA TATIRRLTKE PHGMLLVTGP TGSGKTTTLY AALSEINTGR DKIITIEDPV EYELSGILQI PVNEKKGLTF ARGLRSILRH DPDQILVGEI RDPETAEIAV QAALTGHLVF TSVHANSALD VVGRFLHMGV DPYNFMSALI GIVSQRLLRL KCPECAPASP DPGSRSVGCP ACRYTGYRGR TVVWEIVPVN DTIRELVIQR EPLRLIREQS RQMGVVSLRD QAVRMVERGL TTFEEIDRVV SPNE
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