| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00899 |
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| Symbol | RSp0440 |
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| ID | 1222747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | - |
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| Start bp | 551701 |
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| End bp | 552792 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637240300 |
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| Product | putative multidrug resistance transmembrane protein |
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| Protein accession | NP_522001 |
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| Protein GI | 17548661 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.359729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACAC ACTCTCGCTT TCGTGCATTT GCCGGCCTCA CTGTTGCTGC CACGCTGGCC
GGCGCCTTCC TCGTCCTGAA TCGCCCGGAG TCCGAGGCTT CCGAGCAGAG CACCGACGAT
GCCTATGTGC AGGCCGACTC CACGGTGATC GTCTCGCAGG TGGCCGGCAC CATCACCCGG
GTGGAGGTCG CCGACCACCA GGAAGTGCAG GCCGGCGCCC CACTGGCCAG CATCGATGAG
CGCGACCTGC GCATCGCCGC CGACAATGCG AAGGCCCACA TCGCCAGCGC CCAGGCCACC
ATCGACGGCC TGCAAGCCCA GATCGCCCGG CAGCAGAGCG CGATCGAACA GGCGCGCGCC
GCAGTCGCCG CCACCGGCGC CAATCTGAAG CTCGCCGAGG CCAACCGCAA CCGCTTCGCC
AATCTGGCCC GCGACGGCTC GGGCACGGTC CAGGCCCAGC AGCAGGCCGA CGCGCAATGG
GATATCCAGC GCGCCGCGCG CGAGCGGGAC CTGGCCGGTC TGCACTCGGC CGAGCAGCAG
ACCGCGATCC TGCGCGCGGA CCTTGAAAAG GCGCGGGCGA GCCTGCTGTC GGCGCAAGCG
GAAAAGGCGA CCGCGGAGCT GAACCTGTCC TACGCCCGCG TGATCGCGCC CGTCAGCGGC
GTGGTCGCCC AACGCAGCGC CCGCGTCGGC GGCTATGCCC GCGTGGGCCA GCCGTTGCTG
ACGCTGGTCC CGCTGGACGC GGTCTACGTG GAGGCCAACT TCCGCGAAAC GCAGCTCGCC
CACGTGCGGG TCGGGCAGCC GGCGACCATC ACCGTGGATG CGCTGCCGAA CGTCCGGCTC
AAGGGTCGGG TAGAAAGCCT CGGGCCGGCC AGCGGGGTCA GCTTCTCCAC GACCCCGCCC
CATAACGCCA CCGGCAACTT CACCAAGATC GTCCAGCGCC TGCCGGTGCG CATCCGCATC
GAGCCGGGGC AGGAAGACGC CCGCCTGCTG CGCGTCGGCA TGTCGGTGCG CCCGTCCATC
GATGTGCGGG CCCAGGAGAC CCAGGCGAAG CATCCGGGGA AAAGCCCGGC GAAGGCGATC
GCGTCGTCGT GA
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| Protein sequence | MTTHSRFRAF AGLTVAATLA GAFLVLNRPE SEASEQSTDD AYVQADSTVI VSQVAGTITR
VEVADHQEVQ AGAPLASIDE RDLRIAADNA KAHIASAQAT IDGLQAQIAR QQSAIEQARA
AVAATGANLK LAEANRNRFA NLARDGSGTV QAQQQADAQW DIQRAARERD LAGLHSAEQQ
TAILRADLEK ARASLLSAQA EKATAELNLS YARVIAPVSG VVAQRSARVG GYARVGQPLL
TLVPLDAVYV EANFRETQLA HVRVGQPATI TVDALPNVRL KGRVESLGPA SGVSFSTTPP
HNATGNFTKI VQRLPVRIRI EPGQEDARLL RVGMSVRPSI DVRAQETQAK HPGKSPAKAI
ASS
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