| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RS00896 |
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| Symbol | RSp0437 |
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| ID | 1222744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003296 |
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| Strand | + |
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| Start bp | 549539 |
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| End bp | 550759 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637240297 |
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| Product | transport transmembrane protein |
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| Protein accession | NP_521998 |
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| Protein GI | 17548658 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.124825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGG GTAGTGATGA GCCCTGGCGG CGCAACCTTG TCGTTTGCCT GTTCGGCTCC
TTTTCGACGG TCCTGGCGAT GACGCTGATG CTGCCGTTTC TGCCGATCTA TGTGGAGCAA
CTCGGCGTGA TCGGTCATGC CGCCATCGTT CAATGGTCTG GCGTCGCGTT TGGGGCGACC
TTCGTCACCG CGGGGCTCAC TGCGCCGCTA TGGGGGCATC TGGGCGACCG CTACGGCCGG
AAGCCGATGC TGTTGAGGGC GAGTCTCGGG ATGGCGATCG TGGTGTCGCT GATGGGGCTC
GCGACGAACA TCTGGCAATT GGTCGCGCTG CGCCTATTGG TCGGTCTGGC AGGCGGGTAC
GCGTCGGGGG CCACGATCCT CGTCGCGGTG CAAACGCCGA AAGCGCGGTC GGGCTGGGCG
CTTGGGGTGC TCGCTTCCGG TGTGATGGCC GGCAATCTGG TGGGGCCGCT CGTCGGTGGC
GCATTGCCCC CGATGATCGG CATGCGCGCC ACCTTCTGGT GTGCCGGTGG ACTGATCTTC
GTCTCGTTCC TCGCGACGGC GTGGCTGGTC CGCGAAGCGC AGAAACCGCC GGAGGCGGTG
CGGACCGTTG CCTCTTGGGC GCAGGTTCCA AACAAGCGCG CCGTCATCGC GATGCTGCTG
GCCGGGCTGA TGCTGATGGT CGCCAATATG TCCATCGAGC CCATCATCAC CGTCTATGTG
CAACGCCTCG TCAGCGATCC GCGGAAGGTC ACGTTCGTGG CGGGTCTGGT CATGTCGGCC
GCGGCGCTGG GCAGCGTGCT TTCCGCTTCG CAGCTCGGCA AGCTCGCAGA CCGGATCGGC
CATTCCACCG TGATCATCAC CGCGCTGGCT TCGGCCGGGC TGCTGCTCAT CCCGCAGGCG
TTGGTCACGG CAAGCTGGCA GCTCATCGGC TTGCGCTTCG CCATGGGCCT CGCGCTGGGT
GGTCTGTTGC CCTGCATCGC CGCAGTCCTG CGTCACAACG TACCCGACCC GCTCGTCGGC
AAGGTGATGG GCTATGCGCT GTCATTCCAG TTCGCGGGGC AGGTTGTGGG GCCCTTGGCC
GGTGGCTTTG TCGGCGGTCA CGCCGGTATG CGTGCCGTGT TCTTTATGAC TGGCGGGCTG
TTGCTGCTTG GCGCTTTTTT TATCTGGCGG ATCGTGGGCT TCGCGCCGGG CCGGTCACGT
ATTCGCGCTT CCCGTCTTTG A
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| Protein sequence | MTPGSDEPWR RNLVVCLFGS FSTVLAMTLM LPFLPIYVEQ LGVIGHAAIV QWSGVAFGAT
FVTAGLTAPL WGHLGDRYGR KPMLLRASLG MAIVVSLMGL ATNIWQLVAL RLLVGLAGGY
ASGATILVAV QTPKARSGWA LGVLASGVMA GNLVGPLVGG ALPPMIGMRA TFWCAGGLIF
VSFLATAWLV REAQKPPEAV RTVASWAQVP NKRAVIAMLL AGLMLMVANM SIEPIITVYV
QRLVSDPRKV TFVAGLVMSA AALGSVLSAS QLGKLADRIG HSTVIITALA SAGLLLIPQA
LVTASWQLIG LRFAMGLALG GLLPCIAAVL RHNVPDPLVG KVMGYALSFQ FAGQVVGPLA
GGFVGGHAGM RAVFFMTGGL LLLGAFFIWR IVGFAPGRSR IRASRL
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