Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS00895 |
Symbol | RSp0436 |
ID | 1222743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | - |
Start bp | 548758 |
End bp | 549375 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637240296 |
Product | transcription regulator protein |
Protein accession | NP_521997 |
Protein GI | 17548657 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0473063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.887973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCA ACATGGAGAT CGGCCCCGGC GAGCGCCTGA CGGAACGCTG GGCCGAAGCC CAGTTGGGCG CCTCGCGGAC GCCGGTCCGG GCTGCGTTGT TGCGCCTGGA GACGGACGGC CTGATCTGCC GCGAAGGCCG CGGCTGGATG GTGACGCCGC TCGACATTCA GGAGATCGAG CAGCTCTTCG TCTATCGCGA GGTCCTGGAA GTGGCTGCAA TCCAGCTTGC CGCGAAGCAC GCAAACATCG AAGCGCTGGA CCGGCTGGAG GCCGCGCTTG AAGCCTGCAG GCCGGGCACG TCAACACGTG AAGCGCACCA GCTCGGCACG GAATTCCACG TTCAACTGGC GGCGCTGGCG GCCAATGACT TCATCGCCCG TGGCGTTGCC GACGCCATGA CGCGCCTGTC TCGCGCCCGC TGGCTGGACA CCACGCCCGA GCATCAGGGC TGGGACGAGC ATCGCGCGGT GCTCGCGGCC TTGCGCGAGG GCGATGCCGC CAAGGCATCC GCACTCGTCA GCCAGCATCT CCGCGATAGC CGCGATCGGC TGATGAAGAT CCTGACCGAG GGACGCCGCA GCCTGCGGGC TCGCGGGATC ATGGTTGAAC GGAGTTGA
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Protein sequence | MILNMEIGPG ERLTERWAEA QLGASRTPVR AALLRLETDG LICREGRGWM VTPLDIQEIE QLFVYREVLE VAAIQLAAKH ANIEALDRLE AALEACRPGT STREAHQLGT EFHVQLAALA ANDFIARGVA DAMTRLSRAR WLDTTPEHQG WDEHRAVLAA LREGDAAKAS ALVSQHLRDS RDRLMKILTE GRRSLRARGI MVERS
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